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Mutant Lines
53-2202-1

53-2202-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 20775539 [Map]; Strand: c
- AT5G51100.1 - [+] show detail - Fe superoxide dismutase 2
  Distance: 0; Region: intron1 (CDS)

CTCCCTCGTC TCTCTTGTAC TCTCCTCTGC TTCTTCCTTC TCAAGGTCTC 
TCCTTTTTCT ATCTTACTCT CTCGCTTACT ATGAACACTT GGGGGGTTTT 
AAATGGGTTT AGTTGGTGAA TTACAGGGCC AAACCGGCGA ATGCAATGGA 
AAAGAAACGG AAAGGTTTGT TTTTGAAACT TCTCTTTTAT CTCCTCCAAG 
TTTGAATTAG CTGATGAATT

3 prime edge [+] show sequence

Chromosome: 5; Position: 20724807 [Map]; Strand: w
- AT5G50940.1 - [+] show detail - RNA-binding KH domain-containing protein
  Distance: 0; Region: intron1 (CDS)

GCGCAATCTC GTTCTGAGAT TTTCCTTTAC CTACAACATA AAACACTCAG 
AATTTCTTTG ATACATTAAC CTTAGAACAA ATCGAGATCC CTCATACATA 
ATCTTCAATG TGTAATANAC AAAAGGATCC AGATATATAC CTAAACCATC 
CTCCAGCTTC TGTTTCTTCG TCGGAGAAGA GTCAGATTGT GACATTGTTA 
TCTAACCCGG CTATCAGACC TAGCTTACAA TATCTTTGCT TATACGTGGT 
ATATAACACA GAAAACAGAT CACAAATCCC TAAGAGATAT ATGTTGACCT 
ACAGAGAATA TAGAGATAGA TTCTCGATAT TTTATATACG CAACTTCNAG 
ATAATGAGAT ATATACGCGT AT

AT5G50940.1

Model type: Protein coding
Short Description: RNA-binding KH domain-containing protein
Computational Description: RNA-binding KH domain-containing protein; FUNCTIONS IN: DNA binding; INVOLVED IN: transcription from RNA polymerase II promoter; LOCATED IN: DNA-directed RNA polymerase II, core complex; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II, heptapeptide repeat, eukaryotic (InterPro:IPR000684); BEST Arabidopsis thaliana protein match is: KH domain-containing protein (TAIR:AT4G10070.1); Has 146 Blast hits to 142 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 13; Plants - 78; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G51100.1

Model type: Protein coding
Short Description: Fe superoxide dismutase 2
Curator Summary: Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.
Computational Description: Fe superoxide dismutase 2 (FSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to UV; LOCATED IN: chloroplast, nucleoid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Manganese/iron superoxide dismutase, N-terminal (InterPro:IPR019831), Manganese/iron superoxide dismutase (InterPro:IPR001189), Manganese/iron superoxide dismutase, C-terminal (InterPro:IPR019832), Manganese/iron superoxide dismutase, binding site (InterPro:IPR019833); BEST Arabidopsis thaliana protein match is: Fe superoxide dismutase 1 (TAIR:AT4G25100.5); Has 11522 Blast hits to 11521 proteins in 3361 species: Archae - 194; Bacteria - 8106; Metazoa - 433; Fungi - 799; Plants - 399; Viruses - 1; Other Eukaryotes - 1590 (source: NCBI BLink).
Link: InterPro Scan - TAIR