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53-2205-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 149939 [Map]; Strand: c
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2205-1 - 5-prime edge 
    GAAGTTTTTT CTCATGTTCG AATGGCGCTT GCGTATGATC CTCTCTTCAT 
    TACATCGGAC AAATCTTTGT CCGCCTTTGA TGTTGCCTCT TCACCGCCTC 
    AGCCCATGAA TTTAACACAA GACGAGCTCA AACGTATCGC CGCTTACAAA 
    GCCGTGGAAT TCGTCGAGTC CGGCATGGTT CTCGGTCTCG GAACCGGCTC 
    CACCGCCAAA CACGCCGTCG ACCGAATCGG CGAGCTTCTC CGTCAAGGCA 
    AACTCGAGAA CATCGTTGGT ATACCAACGT CTAAGAAGAC GCAGGAGCAG 
    GCTCTGTCTC TCGGCATCCC TCTCTCTGAT CTCGACGCAC ACCCTGTCAT 
    CGATCTCTCC ATCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 150047 [Map]; Strand: c
      • AT2G01290.1 - [+] show detail - ribose-5-phosphate isomerase 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2205-1 - 3-prime edge 
    ATCCCGACAG ATANAAAAAC AANCANTCAG GATTGTCGGA AAAAAAATCG 
    AANATTGGAC AAGACTAAGA GATGAATTTG GTGTAAAGGA AAACAAAATT 
    GCAGAAAAAA ACGAAGGAAG AAACNTTGTG GATTANGGAA ANCAAATNTG 
    AAATCNATGA AACGTTCCTA GGAAGGAGAT TAAGGAACCC TCCGACGGGA 
    AAAATGAGGG AGAAAGATAA GATTTTTGAG AAATTAAGAA TGAAGAGAGG 
    AGGTCGAATG AATATATTGA GGAANAATAN CGTGAAANTT ACNAAGAATG 
    AANAATGTAT TTGTGTGGTG GCGGAGAAAA G

AT2G01290.1

Model type
Protein coding
Short Description
ribose-5-phosphate isomerase 2
Curator Summary
Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.
Computational Description
ribose-5-phosphate isomerase 2 (RPI2); CONTAINS InterPro DOMAIN/s: Ribose-5-phosphate isomerase, type A, subgroup (InterPro:IPR020672), Ribose 5-phosphate isomerase, type A (InterPro:IPR004788); BEST Arabidopsis thaliana protein match is: Ribose 5-phosphate isomerase, type A protein (TAIR:AT1G71100.1); Has 5035 Blast hits to 5035 proteins in 1937 species: Archae - 235; Bacteria - 3542; Metazoa - 112; Fungi - 145; Plants - 141; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR