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53-2217-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171721 [Map]; Strand: c
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2217-1 - 5-prime edge 
    GTNNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TGAGGCTATG TTGGAGAAGA GTGTGCGTTT 
    GACTGACCTT ACGTCTTACT TCGTTGATGC TTCGAAGAAC TAGAGCTATT 
    AGTTACTTAG ATTTGTCGGT TTTTTGTATC GGAATGCTAT GCATAATGCT 
    TTCTTTTGTT TTTCGGATTT AGGATTTGAT TCTTTCTGGT TTGTTTTTTT 
    GGGGTTGAAA GATTCTCTAC CTTATAATAT TTATTTTTTT ATTCGTCAAC 
    TTGTCCTTAT TATACCTCAT CTTTGTCTTT TAGAAGTTCT TGTACCAACT 
    CCAAGAACGA ATCTATGTTC CTGACAAAAC CGCCTTGTAG CATTGTTAGG 
    TAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 171724 [Map]; Strand: c
      • AT4G00390.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2217-1 - 3-prime edge 
    TTTAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTC 
    AAGCTCTTTA GCTTGCATCA ACTGAAACTT CTCTTCAACA ATCTTCTTAG 
    TCTCAAGAGT AAACGAACTC CATTTCTGCC TCACATAATA CTCATCAATA 
    CCCGAACCAG CAATCATCCT AGCAAGAGAC GACTTCTCAA ACCAATCATC 
    TCCATTAGTT GAAGAAACAC CAACAAACGC CAAGTCTTGC TTTACAGAAT 
    CAAGCTACCG

AT4G00390.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; LOCATED IN: nucleolus; EXPRESSED IN: seed; EXPRESSED DURING: E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT1G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR