1. Home
  2. Mutant Lines
  3. 53-2218-1

53-2218-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26136165 [Map]; Strand: w
      • AT5G65410.1 - [+] show detail - homeobox protein 25
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2218-1 - 5-prime edge 
    NAAACTAACA AAATCGGTTA TACGATAACG GTCGGTACGG GATTTTCCCA 
    TCCTACTTTC ATCCTCACAT TTCTCGACTT CTTGAATGGA GTTTGAAGAC 
    AACAACAACA ACAACGACGA AGAGCAAGAA GAGGATATGA ATCTTCACGA 
    GGAAGAAGAA GACGACGACG CCGTTTACGA CTCTCCTCCT CTCTCTCGTG 
    TTCTCCCCAA AGCCTCGACA GAAAGTCATG AAACCACCGG AACTACTTCC 
    ACAGGCGGTG GCGGAGGATT CATGGTTGTT CACGGCGGTG GAGGGAGCAG 
    GTTTAGGTTC CGTGAGTGTC TCAAGAACCA AGCGGTGAAC ATAGGAGGAC 
    ACGCGGTCGA TGGTTGTGGT GAGTTTATGC CAGCTGGAAT CGAAGGTACC 
    ATCGACGCTC TAAAATGCGC CGCTTGTGGC TGTCACCGTA ACTTCCACCG 
    CAAGGAATTA CCTTACTTCC ATCACGCGCC GCCACAACAT CAGCCTCCTC 
    CTCCCCCGCC AGGGTTTTAC CGTCTTCCAG CTCCGGTTAG CTACCGACCA 
    CCACCGTCAC AAGCTCCTCC TCTTCAGCTC GCTCTTCCCC CTCCACAAAG 
    AGAGAGATCA GAAGATCCAA TGGAGACGTC TTCAGCTGAA GCAGGAGGAG 
    GAGGGATTAG GAAGAGGCAT AGGACTAAGT TTACGGCTGA GCAAAAGGAA 
    AGGATGTTAG CTTTAGCTGA GAGGATTGGA TGGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26135014 [Map]; Strand: c
      • AT5G65400.1 - [+] show detail - alpha/beta-Hydrolases superfamily protein
        Distance: 1755; Region: intergenic
      • AT5G65410.1 - [+] show detail - homeobox protein 25
        Distance: -1080; Region: intergenic
    Flanking Genome Sequence: 53-2218-1 - 3-prime edge 
    AAATGAAAAC GGTAGCAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT 
    CAAACTACGT CGTTNTTGGG GAGAGGAGGT TTGTCACNAA GGTNAAGAAT 
    AANANAGTAT ATNTTGANGA CTTGTTTACA TANANNACAC NCTCTCTNNC 
    ATCNCTCTCG TTTTNNATTA GCCGTNNTAT ATANTGTANA CTANAGNNAT 
    TATTTANTAA TANTTCTNAA NAGNNGACAA CAANCTTNAC ACCTTGAAAT 
    TATNNGGGGC ATTNCTGNTT NTGANGTGAT NAGACNGCCC ATCNNTTTAT 
    TGCAAAAAAN TATTANNGCN TNTNTTNATG CTNTTGGCAT NTGGACAAAA 
    ATAATTATCG CGTTTATTTT GATANTNTCC CCTTTTTTTT TANTTCCCCA 
    AAAAGTTNTN TCTAANATNA NCTCCNCNCT NTTTTTGTTT TTTAATCCNN 
    CNCTAACCTT TTTNTNTGGG NGGGTNGTGC GNAATAACNA AGCCTGATGG 
    NAAACTAGGC AACCCCNCCC NCCNCCNACC GNGGTTNAAA ANAAGCCCNC 
    CANCTACCCC CNCCNAAAAA AAAAAAACCG NNTNGATTTT TTGTTTTCCN 
    NGATNNCAAA AACAGNTNTT ATTTGGNNGG GGTTTAAANA AAAAAAAAAA 
    AANTNNNTTC NTTCTTTCAA TNTNGAAAGG AAGTTACCTT CTTTCCTTTT 
    TTACCCCCCN CCCANAAAAA AAANGGGGTG NNTGGATNCA AGANNCCCNN 
    ACNCCAAANT NTNTNCTTTT TAACGGGTGT TTTNAAAAAA AAAAAAAGGN

AT5G65400.1

Model type
Protein coding
Short Description
alpha/beta-Hydrolases superfamily protein
Computational Description
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65410.1

Model type
Protein coding
Short Description
homeobox protein 25
Curator Summary
Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.
Computational Description
homeobox protein 25 (HB25); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Zinc finger, C2H2-type (InterPro:IPR007087), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 22 (TAIR:AT4G24660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR