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53-2222-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24218140 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -449; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2222-1 - 5-prime edge 
    TTTCTAGCTT CTCTTTCGAG CCCAAGATCT GACGATTAGG AAATCCGGAA 
    TCCTATAGCT AGGTTTTTTC AAACTTACAC TGAGAAAATC TCTTCGGAAG 
    TTGTAGGCGA AAATCCTAGT CGGTAAATCG GAAATTGTTC GGCCGATGGA 
    AGAGACGACT GTTGATAGAA TATCCCGGCC TCGTAAGCGG GAAGAGGTTG 
    AAAAACTTGA AATTGAAAGA AGATCGGACC AACGTTCTCT ATAATCTCAG 
    GTTATTATTG TCATTTAAAG CAAATCGATT GGGCCGGACT TTAAAGCCCA 
    TTTATTTGAA TTTTAAATTC TCGTTCACCC TTTATTGGTT TGGTTTGGTT 
    AGGATAATAT TTTTTCGGTT TGATTAAAAT CATATCGGTT CGGTTCATGG 
    AGCATTGAAG TAAAAGTAGT TAGCACATGT TTTATTTTTC CATTTGTAGC 
    AATAAGCCTA GAAGACAATA CAGTCTCTGT GTTATGCTAC AAAAGGCAAA 
    ATCTCTAAAG CAAACCAAAA GATCGGAGAT CTATTAACAA AGCTCTTTTA 
    CTTTTCTATT TTCAAGAACC ATTTTCACCT TCACTTTCAC TAAAAGAGTT 
    AGGGTTTCAA AGAGGTGAAG ATGATGAACA GAGGTTTCTT CTTTAGACTC 
    TTGGTTTTAT GTTAAGATCT TTATGCTATT GGTTGNTCTT GATTCTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24218256 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -565; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2222-1 - 3-prime edge 
    GCTAGAAATG GATAAGGATC TCTTAGATAT CTCTGGAGAA GACGACGAAG 
    ATAATTGGCT TCTGAAGAAT ACGCCGAAGA AAACTAATTC GAGCCGAGGA 
    AAGAGTTATT TGAAATGCTC ACCTCTCCAA ATCCCTAGAT CTAGTCGTAT 
    CGTTCCTACT CGGCCTCCTT TTTCCCCAAT TGGTAAGCGC TTCAATTTCT 
    CGTTCTCGAT CCGAGCTTCG TTCTGATAAT TTCTCTCTCC CTTTGTTAGA 
    GTGTTTAAGC ATCTGAATTA GCATTGTTTA AATCTTAATT TGATAAAATA 
    GCAAATTAGT ATAAATGTTG TGTATTCTGC GGATATATGA AGGTTAATAC 
    TTTTTGCAGG AAGAGTAACA GGCACCAGCA ACAACAGGGA GCAGCCATGC 
    GCTTCAGTTG ATACAGATAG TGTAGGAAAG GAGAATGCTA AAGTTGAATT 
    GCCCAAATTG AGTGTGGAGC GACAACAGAT GAAGAAGAAG AAAAAGAATG 
    CAGGGTTTAA TTTGCGCAAG AGTTTAGCAT GGGATAGAGC TTTTTCAACG 
    GAAGAAGGTG ACTTTTTTTT ACCAATTTCC TGTTAGTAGT AAAGGTCAAA 
    GATTTGGTCT ATGTTACTAA GAATCTTAAG ATGTGTGATA TGGTCATGAA 
    CCAGGTGTTT TGGATTCATC TGAGTTATCT AAAATAACTG GAACTGCTTG 
    CCATCTTGGT G

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR