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53-2226-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8332360 [Map]; Strand: c
      • AT1G23480.1 - [+] show detail - cellulose synthase-like A3
        Distance: -660; Region: promoter
    Flanking Genome Sequence: 53-2226-1 - 5-prime edge
    TAACTAACTT ATCTAAACAT CTACTATATA ACTTAGTTTC CGATATCAAT 
    ACGTATTTCA GTTTCATAAA CAATAAACTT CCAAGTTCAG AAATTTATGT
    TGAAAAAATA CTTGCACATG AATTTGTATG GGGAAAGAAA AATATTTGAT
    ACAAAAGGTG GACAAATGCT GTTAACAACA ACCTTAGTTA TGGTTGATTA
    TGAACACAAA CATAAGATCA TTTTACTGTA CCATATGCTT CATTAAACTA
    TTTTACCTAT CATCCCTCAC TACAACAACA CTTTGAACAT CACCATCAAA
    GCTCATCGTG GCCAGTCTCG GCTTCCTCTG ACTTGTGAGT CTGGTCCAAG
    CCTTTGTCGT CGTGCGAGTA GACTCCATAC CCAAATCCTT CAGCTGAATT
    ACAGTACGCT TCGACTTGAG CGTCTTTGCC TTCAAGATTC ACATTGTTGA
    GGACAATGTG GCTGCAAGGG ACTGTGTGGC TGCACGCAAA TTTGATGGCT
    TTCGCACTCT TGGTTATGTT CCGGTACATT ATATGGCTGA TTTTAACCGC
    GGAGGTCTGC ATTTATACCA AAAAAAGGAA GAGAACATAA CTGAGTATTG
    GTTCGATATA AGAATCACAA TCACAAGTTT GTATTGTATA TTATAAGGAA
    ACCTGGTTTT AACATGTAGT TGAAGAATCA CAGTAGAACT GATCGATGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8332483 [Map]; Strand: c
      • AT1G23480.1 - [+] show detail - cellulose synthase-like A3
        Distance: -537; Region: promoter
    Flanking Genome Sequence: 53-2226-1 - 3-prime edge
    AATTGTCTTA GACTTTGGGA TTAGAGGAAC AAGAACAACA CATCACATGG 
    GGACTCCAAA GGTCGCAATT GATATGAATT GTTTGATATG TCTGTCACGT
    GTGAAAAACT CTTCCTTTCT TCACAATTAT CATTTTCTCT CTTTCTCTCT
    CTCTTTCATC TCNCTCGAC

AT1G23480.1

Model type
Protein coding
Short Description
cellulose synthase-like A3
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like A3 (CSLA03); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 4758 Blast hits to 4752 proteins in 1373 species: Archae - 199; Bacteria - 3673; Metazoa - 9; Fungi - 91; Plants - 500; Viruses - 11; Other Eukaryotes - 275 (source: NCBI BLink).
Link
InterPro Scan - TAIR