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53-2285-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24017107 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -497; Region: promoter
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -607; Region: promoter
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: -404; Region: promoter
    Flanking Genome Sequence: 53-2285-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCTA ATTTCTTGGT CAGACAATAA GGCAACTTGG 
    TTTTTGAAAG ACCATTTGAA TTGATCTCAG CTGTTATATA GTTTATCACT 
    CTATAGCTAA TACATTAAGA ATGTTCAGAG AGAAAGAGAG AGAGATACAC 
    ACNGGAGTTT GAATTTGTAG TGGTCAGTGA ATTGAATTGG TCCATTTTTC 
    CATGGTTTCT CTAATGAAAC AAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24017170 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -560; Region: promoter
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -670; Region: promoter
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: -341; Region: promoter
    Flanking Genome Sequence: 53-2285-1 - 3-prime edge 
    GGTTTCTTTG GATAATGTAG ATATTCAAGT TCTTGATTGT GATGTCCGGA 
    GATTATTTTC CTAGTCTTCT TGTGTTTTTT CAATAGAAAA TACAATTTTC 
    TCATTTGTTT CAGTCATTTC CCATTATTAT ATTTTCACAC TAAAGACCTC 
    TTCTCATGTA GCCAGAGCTT TTATTTGCCT TCCATGTCCG TTTATGTTTA 
    TTTCATACAT GCGCTGTTGT TAATCTCTCA AAACTTTGGA ATTGTAATGT 
    TTTGATATAT CTTCAGAAGT AACTAATTAT GGAGAGTCCT TGTCGGGTTT 
    TGGTGGCGGT ATTAGGAACC TTGGTAAGTA TTCATATTGT TCAAGCTCAG 
    GAGCAACAAG GTATTCACAT CTTAGCTGTT TTATATGAAT ATGCGCCCTC 
    TTAAAATGGT ACTTGTGTTT GCAGATTCTA GAATTTCTCA GAAT

AT5G59613.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59613.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
Link
InterPro Scan - TAIR

AT5G59616.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR