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53-2321-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26460806 [Map]; Strand: c
      • AT5G66211.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -976; Region: promoter
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -346; Region: promoter
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -371; Region: promoter
    Flanking Genome Sequence: 53-2321-1 - 5-prime edge 
    GTGTATGGGA TTTTGTTTTG AGAAAGAATA AATGGACAAC TATGAGTGAG 
    TAGGTTAGCT TGGATCATCA TTTTTGTTTG TATACCATGT ATAGTATAAG 
    CTGTATATGT TAGTTATATC CACCATTCGT TTTAGCNTTC TCATGCATGC 
    CGTGCACACA CCAGCGATAT GCTGTAATGA AAATTTTGAA GTTTGAGGAA 
    AAAAATGATT GGGCCCAAAA GATGAAAGCG TATTGGGCCC GGTTGGTTGG 
    GCTCACTAGT GATCATAATT GGTGAGAGGG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26460927 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -225; Region: promoter
      • AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: -250; Region: promoter
    Flanking Genome Sequence: 53-2321-1 - 3-prime edge 
    CACCAGACCT CTAAGTTCTA AGTCTACGAC TACGAGCATA GTCACAATGT 
    CTCTCGCCAA CAGTCTCTTA TCATCAAGTA AGTTTCATTA TTTTCTCCCC 
    AATATCACTT TGTCGCATGC ATTTCCATCC AGTACTATTA ATTGAATCTC 
    TTTTTTTTNG GTNGAAAATA TTCATTTCCC CATCCAATCT CCTTTAAAAA

AT5G66211.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66220.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR