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Mutant Lines
53-2341-1

53-2341-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 10463246 [Map]; Strand: c
  - AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
    Distance: -445; Region: promoter
  - AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
    Distance: -157; Region: promoter
  - AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
    Distance: -177; Region: promoter
Flanking Genome Sequence: 53-2341-1 - 5-prime edge
```
GTTGGTTGGT TTGGCGATTG CCTCTCCTCT AATTGTTAAA TTATTAATTA 
CTTATTTATT ACTAATTAAG TAAATTACAG AGGTAATCTG ATTGTGGTTA 
TACGCAATTT ACAGCTCTCA CTTGCACACA AACTTTTCTT TCTAATCGCA 
ATGCCTTTGC TTACAGAAAT GCATGCATTT CGGTTTGGTT TTGACAACAT 
ATTTATGTAT CTAAAGAGGA AAAAAAGAAC ACAAAAACAT TAGTGTGGAT 
TTGCCTATAG ATAAACAAAC GTAGTGGACC TTTCTGGTAG GTGAGGGATA 
AGTTGGTACC AAACATCAAT GTTCACATAT TTGTTTGGTG TTAAAGC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 10463362 [Map]; Strand: c
- AT1G29880.1 - [+] show detail - glycyl-tRNA synthetase / glycine--tRNA ligase
  Distance: -561; Region: promoter
- AT1G29890.2 - [+] show detail - O-acetyltransferase family protein
  Distance: -41; Region: promoter
- AT1G29890.1 - [+] show detail - O-acetyltransferase family protein
  Distance: -61; Region: promoter

CAACCAACCG TACGATTGAA TTTGAAGAAA ACGACGTCGC GTCCGCCATT 
TTCTTCTTCC TTGAAGCAAT AGCTTCTTCA CTTCAGATCT CTTCTTCTTC 
TTCTTCGTTG CCACTGCCCC AATTAACTCT GTCTATCTCT CTCTTCATCC 
CCTAGATTGA AACTAATTGC AATTGGAGTG TATATTGCAG TATCTAGTTT 
TTGAATCTCT GGGTATTCCT TTATGGATCC AGTAGATATG GTTGTGTCAC 
AGCCAATTAC GCCTGGTCAG GTACAATTTT TCATGATCTT CGGTGATTCA 
AGTTTCGATT TACATTCTTC TCCAACTTCC CGGAGCGGAT TTTGAGATTT 
TGATTGAATT GGCCTGTAGC TTAATGTGAT TAGGACTCTC TATCTTTCTC 
CTTTATATGA ATGTGGTTGA TTCATTCTTC AGTTCATCGG TTGCTTGCTA 
GATTTAGATT AATGTTGGCT G

AT1G29880.1

Model type: Protein coding
Short Description: glycyl-tRNA synthetase / glycine--tRNA ligase
Computational Description: glycyl-tRNA synthetase / glycine--tRNA ligase; FUNCTIONS IN: glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; INVOLVED IN: response to cadmium ion, glycyl-tRNA aminoacylation; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro:IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro:IPR002315), S15/NS1, RNA-binding (InterPro:IPR009068), Glycyl-tRNA synthetase, alpha2 dimer, C-terminal (InterPro:IPR018160), Anticodon-binding (InterPro:IPR004154), WHEP-TRS (InterPro:IPR000738), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195); BEST Arabidopsis thaliana protein match is: tRNA synthetase class II (G, H, P and S) family protein (TAIR:AT1G29870.1); Has 6392 Blast hits to 4464 proteins in 1181 species: Archae - 269; Bacteria - 3324; Metazoa - 242; Fungi - 171; Plants - 75; Viruses - 0; Other Eukaryotes - 2311 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.1

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 271 Blast hits to 269 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 41; Plants - 106; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G29890.2

Model type: Protein coding
Short Description: O-acetyltransferase family protein
Computational Description: O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR