1. Home
  2. Mutant Lines
  3. 53-2348-1

53-2348-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 62928 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -482; Region: promoter
    Flanking Genome Sequence: 53-2348-1 - 5-prime edge 
    CCGATAACCA AAACCGATGT AAATCTGTTA TTTGGAAAAA CATTCCTTAC 
    NACCCCGACG TAAACAAGAC TCACCTGTGA ATTTATAAGA CTTGCTATGG 
    TCATGAGTCA GAGGATCCAC CTGGTGATAT ATAATTAATC TCCATAGAAA 
    CTAGTAAGTC TTATAGATTA TTCTACAAAC ATAGAGAATC CGTCGGTCTT 
    GTTTATTATT TGCTAAGTTT ATTCTCTGCT TTTATGAAAT TATTTTCTCA 
    TTCTTTTCTT TACTCCAATG AACCATTGTA CTTTTCAGCT TTCTTGAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 63048 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: -362; Region: promoter
    Flanking Genome Sequence: 53-2348-1 - 3-prime edge 
    TCGGGGNTGG TTTTACNTGN TATTGAAAAT TTCTCTATAT TTTATCTATC 
    TCTAATCTCT ATGATGAATT CATGAATGGT GATACAATGA GACTAAATGA 
    GAATGAAAAA GTTTATAGTT GTATGTAAAC ACCTGATCAT CTTTGTAATA 
    GGGTTATGCA TAATATTGTG AGTAAAAGGC AACAGAGAAT CTTCAAGTAC 
    ATCGGGAACT AGGTCGATCA TCGGATTAGG TCATTCATCG GATTAGGTCA 
    TTTAGGGGTT TACTTCTTAG AGATGGTTAA CATTTTGGTA TTAATAAGTA 
    AACCGATCGG ATTCGGTTCG AATTTAAACA AAACCGAGAT ATTGAATGAG 
    AAGCCCTAGT CTTATCACAT TCTTCTACTC CGTTGAAATG CGAATAGTCA 
    TTAGGG

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR