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53-2363-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 28129255 [Map]; Strand: w
      • AT1G74875.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2363-1 - 5-prime edge 
    TACTTTCATC CAATTCTTGA AAGAAGAAAA AGTACTATGG TTTGTTTAAG 
    ATTGTGAGTA TTGTTTTCTC TCTTGATTTG TTGACTCGGG TTTTTATAAC 
    AATGTTTAGA TTTCCTATTC CTAATAGGAA AAGGAAGTAA TACAAAAGTT 
    TAGAATAAGC CAAAAGATTA AAAAAAAAAA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 11107462 [Map]; Strand: w
      • AT4G20720.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 0; Region: exon2 (CDS)
    2. Chromosome: 1; Position: 1465243 [Map]; Strand: w
      • AT1G05090.1 - [+] show detail - dentin sialophosphoprotein-related
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2363-1 - 3-prime edge 
    GGATTATGTA ATTGTCCCTG AAACATATCA AAATGTTACC TTTGGATACC 
    CAAAACAGAG GAAAAACAGA GGACTAAAAA GGTCTCTGTT ATTGTTATTT 
    TCCCCAAACA AGTTCATTTC CGGATTTTTT TCACCAGAGG GATTCGCATG 
    AATGGTGGGA GGCTGCAGAG ATGTCTGCAG AATGGTTGAG GATGTGAAAC 
    TATCCCAAGT CCCAAAGAGA TCATCTTCTT GACATTTGCC TATGTCAGAC 
    ATCACGCTTG TATCAGTATT CTGCTTCTCA TCCACGCTCT GTTCTTTAAC

AT1G05090.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT4G20720.1); Has 3598 Blast hits to 1413 proteins in 251 species: Archae - 2; Bacteria - 2631; Metazoa - 338; Fungi - 185; Plants - 102; Viruses - 1; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G74875.1

Model type
Protein coding
Computational Description
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G20720.1

Model type
Protein coding
Short Description
dentin sialophosphoprotein-related
Computational Description
dentin sialophosphoprotein-related; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT1G05090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR