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Mutant Lines
53-2372-1

53-2372-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75945 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -556; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -567; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-2372-1 - 5-prime edge
```
CTCTGGAGGA CAATTACCGG TAAGGGCCAC CGCAGCAATG GGTTAGTTCA 
AGCAGTGATC TTTGAAGCCT CCGATCGTAA CAATATCGGT GGTTCAGCTT 
ACGGAGGCCA AAGATCTATT TGCTGCACTC CAGATCTGGC CAAGCTTCAA 
GGCTGTAAGC AGGGTGAGAT CATTAGGATT CCTTCTCCAC ATGACCCTCA 
ATGGCCTATC CTCTTACCTG TCCGCTTTAA AGGAAAACGC TCGTCTGCTA 
AGATGGCAGA CACTGAGATT CTTATCACCA AGACTGGAAT CTATAATCTC 
TTATTCATC
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75829 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -440; Region: promoter
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -451; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-2372-1 - 3-prime edge
```
CTCCAGAGAG TGATGTTCTC AAACCTGCAG TGAGGAGGGA GGATGAGTAG 
AGTAGAGTAG AGAGCATCAA AAGAGTTGAA AATGTAATCC ATAGAATATA 
CCTGATTAAA GATCGGGAAG AGGCGAAGAT GCCCTCGCTG CCACCGTAGA 
GGAGGAGAGA ATTACCGACA TCGTGGAAGG GCTGGGAAGA GTAGATGTGG 
GCGGAGGCCC CAGCGATTCT AAAGTGTAAT GATAGAAGAA ATGGGCACAG 
CAGCGCAGAC AGCTGGATCA GTTTTCCCAA ATCCATTATC GGGGAACGAG 
GATCTCTGAG GCTAACTAAC AGGAAGGAAG CGGGAGAAGA GCAGCTGCAG 
AGTCGCTCTT GTTCTAGCTG CTGCTGACTT TGGTGGACCA ACCAACTTAA 
TATAATGGTT TGGGCCTTAG AATGGTTTGG GCCTATACCG AGAGGCCCGG 
CTTACCCAGA AAGAAATGCA GCAATAGTCA ATGCCACTG
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR