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Mutant Lines
53-2377-1

53-2377-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 17053877 [Map]; Strand: c
- AT5G42600.1 - [+] show detail - marneral synthase
  Distance: 0; Region: intron1 (CDS)

CATCCTCTAT TCTCACTCTC GGGATCTTCT GCTCGAACTT TTTCTCCCTC 
AGAAACTGTT TACCAAAAGA ACAAAATAAT GATGATATAT TTGGAACAAA 
AACTTAAACT GTGCTTGTTA TAGAGAATTG TCATAAAAAA AAAGAGTTTT 
GTTCAAAGGC AAAGAGGTTT CATCACCAAC CTGCCTACGC CAGAAGAGAT 
CGGGACTAGC CTTGAAACGT GACTTGTTGT TTGCGAAATT GAGGCGAGCC 
TCCTCGACCT CGGCGAGTTC CTCAGGAGAG CCCCCGTTGG CATCAAACTC 
CCAGATCTG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 17053995 [Map]; Strand: c
  - AT5G42600.1 - [+] show detail - marneral synthase
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-2377-1 - 3-prime edge
```
AGGATGCAGA GAAGATAACA TATGAAGACG CAAAGACGGC ACTAAGAAGA 
GGAGTACTCT ATTACGCGGC ATGTCAGGCT AACGATGGCC ATTGGCCTTC 
TGAAGTCTCT GGTTCCATGT TCATCT
```

AT5G42600.1

Model type: Protein coding
Short Description: marneral synthase
Curator Summary: Encodes an oxidosqualene synthase that produces the monocyclic triterpene marneral.
Computational Description: marneral synthase (MRN1); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: Terpenoid cyclases family protein (TAIR:AT1G78500.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR