1. Home
  2. Mutant Lines
  3. 53-2379-1

53-2379-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19288460 [Map]; Strand: c
      • AT3G51980.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -908; Region: promoter
      • AT3G51990.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2379-1 - 5-prime edge 
    GATCGGTGTC TCTTGAGAAT GTAGAAGATG TACGGCTTTT GCAATCTGAA 
    GAGCGATTTT GATTCTCTTA CTCCAGCTCG AAATCGCACC GGAGTTTAAA 
    ACAGGTATCT GAGTGAATCA CAGTCGTATA AGCCTTCCGT TTCCCATGAA 
    TTCAACAACG AGAAGTGGTT CTTTGGAGTT ATCGGCGCTA AAACCTAAGA 
    GATTCACAAA CCTAGGGCTA CGGATTCTGG AGAGAATCTC GAATTCGTTG 
    TGGAACTCAC GGCTGATTTC TCGAGATTTC GAAGGTCTCT TGACCGCGAT 
    GTGACGTGAA CCGATGACAG CTTTGTAAAC GCTTCCATGG CTTCCACGTC 
    CGAGGAGATT GTTGATGTCG AAACCTCCTG TGGCTGATTC GAGATCGCGA 
    TGGAGGAAAC GACGAAGTCT AGGACGGTCT TCAATGGGAG ATTCGGGAGG 
    AGCAGAAGCT TTGCTGGAGG TGGATCCGGA GGTTGATGCG GCAGATGAAA 
    CGGCGATTGC GACGGCGGAT CCAGCTTTTG CAGGAGAGAT AACCCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 19288584 [Map]; Strand: c
      • AT3G51990.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2379-1 - 3-prime edge 
    ATACACAGAG ATATAAAATC AGCAAACGTA TTGATGGATA AGAATCTAAA 
    CGCGAAGCTA GGCGATTTCG GATTAGCGAT CAGATGCAAT GTTGATGATC 
    AAAAAGTGAA ATCAACACCA CCTGCAGGAA CAATGGGTTA CCTTAGATCC 
    AGATTACNGT AACGGCTGAT AGATTAAGCA CGAAAACTGA TGTGTTTAGC 
    TTCGGGATCT TGTTGTTAGA GATAATCANC GGAAGAAAAG CAATCGACGT 
    TAGATATTCG CCGTCGTTTA TAGTAGATTG GGCGATTCCG ATGATAAAAA 
    GAGGCAAAAT CGGTGGGATT TATGATCCGA GAATCGGACC ACCGATTGAT 
    GTAAGTGTGA GGAATCATTT GGGGTTAGTG G

AT3G51980.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1C (TAIR:AT5G02150.1); Has 632 Blast hits to 632 proteins in 203 species: Archae - 0; Bacteria - 3; Metazoa - 254; Fungi - 162; Plants - 146; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G51990.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G28390.2); Has 110531 Blast hits to 109509 proteins in 4468 species: Archae - 125; Bacteria - 12250; Metazoa - 41494; Fungi - 9129; Plants - 31227; Viruses - 433; Other Eukaryotes - 15873 (source: NCBI BLink).
Link
InterPro Scan - TAIR