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53-2416-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 976119 [Map]; Strand: w
      • AT2G03240.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2416-1 - 5-prime edge 
    AAGCTCCGTC AAATTCGAGG CCTGGAGAAC ACTTTTAATG GTGGATCGTG 
    GCGTTTCCTT CGTATGGTTA AACTTGACAC GATCCAAAAC CTCAATCGGA 
    GGTGGTCTCC CAGCTTTCAT CTTCCTCACG TCACCGGACA CTTCGCCGGA 
    AACACCGTTA TCTTCTTCTC TCCTCGACCA GCTTCGTCGT CTTCATCTAC 
    CTCGAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 976003 [Map]; Strand: w
      • AT2G03240.1 - [+] show detail - EXS (ERD1/XPR1/SYG1) family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2416-1 - 3-prime edge 
    CGGAGCTTAA ATTTAGCAGA GAGAATCTGA GGAAAGTGGA GGCGAAACTC 
    AGACGCGCCT TCGTTGAGTT TTACCAGAAG CTTAGGCTAC TCAAAAGCTA 
    CAGGTACGTA GTTGAATTGG ATTATCAAAG CGGATTCATG GAGATTTTAT 
    GATTGATGGA TTTGAGATTC GATGCAGCTT TTTGAATGAA TTAGCGTTTT 
    CGAAGATATT GAAGAAGTAT GATAAGGTAA GATTTGGTTT TGAGGTTTGA

AT2G03240.1

Model type
Protein coding
Short Description
EXS (ERD1/XPR1/SYG1) family protein
Computational Description
EXS (ERD1/XPR1/SYG1) family protein; LOCATED IN: integral to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), EXS, C-terminal (InterPro:IPR004342); BEST Arabidopsis thaliana protein match is: EXS (ERD1/XPR1/SYG1) family protein (TAIR:AT1G14040.1); Has 1164 Blast hits to 1104 proteins in 198 species: Archae - 0; Bacteria - 4; Metazoa - 278; Fungi - 369; Plants - 375; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
Link
InterPro Scan - TAIR