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53-2432-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24133955 [Map]; Strand: w
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -571; Region: promoter
    Flanking Genome Sequence: 53-2432-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    NNANCTANGT ACGAGAAGCT TCTTGNNNNA CGGAGACTCT GCGGGAAAAG 
    AANCATGCCT ACTTTTTNCA AGATTNCAAA CACTGCCNTN NATCGGTGGT 
    CTGGAGANAA ATCTCCGGNC ANTTGGCATA AAGAGCTTAC CAGCTAAGGN 
    CCGTNCGANC NCGCTGTGCA NNNTNTAAAT TACTAGCTCT AGCTGGACAG 
    CTAAAATGTT CAATAACTAG TAGATTCTAC TAAAATAATA ATCCATCTTA 
    ATTTTGTTTT AAATAAAAAA TATTTATTAT TAATACCCAT ATATAAATTT 
    ATAAAATTTC AACCAATCAT AAAAATCGGT ACATAACAGA AATGACTATT 
    GTTTGACAAA AAATAGAAAT GACTACTAAA TGCACTTAAA TTTTACATAG 
    AAAATAACAA AACATCTAAT TAAATAAAAC ATATAAAAAA TCCTATAACA 
    TCCTAGAAGT CAAAAATGAA TTTATCTAAA CAACAGTTAG AGCCAATTTA 
    TTTTTAAAAC GTTTTGGCCA CGTCATAATA GGACCGGCCA TGTGTATAGT 
    CCTTTTTTTA ATTTCTCAAA GGCAGTTGAA CTTTAAATAA TTGTTCCACT 
    AATTAAGTCT TAATTAATTT ATTTTTCTTG AATATAGAAG TCGTCATATC 
    GTCCAGAATT TGAATCGTTC TTTGTCACTG AAATTAAATG AAAGGTCAAA 
    CTAGCGAACA GCTAANAGAT TAGTCTTCAT CATCTTCTAA TTGATGCGA

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR