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53-2439-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 10921624 [Map]; Strand: w
      • AT4G20220.1 - [+] show detail - Reverse transcriptase (RNA-dependent DNA polymerase)
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2439-1 - 5-prime edge 
    GCTTTCAACA AGTAATCGAA TATTTCTAGA TCTAATTTGA AGATGCTGTA 
    CTTCATTTTT TAATTTTTAG ATAACACCTC ATAAGATGAC CTTTAGTACA 
    TTAACAATGG ACGAGTTTTG GTCTGGATTT TAGCCACTCA AAAGCTTCTT 
    TTGTGCCCAT ATTTCCCATA GACATTAAAA TACTTGCAAT GGTCGCACAT 
    GAGACGACTT CCACCTCTCC CACTTCCATG TACTCTAAAT GTCTACCAGC 
    CGGTCACCCA TCTCGAATGG AAGTTACTTC AAAACACTGG TGCCAGTTTG 
    TTGGGACTCT TCAAAAACAA AAGAAAAAAA

AT4G20220.1

Model type
Protein coding
Short Description
Reverse transcriptase (RNA-dependent DNA polymerase)
Computational Description
Reverse transcriptase (RNA-dependent DNA polymerase); CONTAINS InterPro DOMAIN/s: Reverse transcriptase, RNA-dependent DNA polymerase (InterPro:IPR013103); Has 55 Blast hits to 55 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR