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53-2453-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25662962 [Map]; Strand: c
      • AT5G64120.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -1960; Region: intergenic
      • AT5G64130.1 - [+] show detail - cAMP-regulated phosphoprotein 19-related protein
        Distance: 1388; Region: intergenic
    Flanking Genome Sequence: 53-2453-1 - 5-prime edge
    ATCGTGTGAT TCACTGAAAC TTCAACCACT GACATCAGAA AAGCGAAAAA 
    TCCGGAAGAT TTTGTGACAT AAGAAAGTCG AAGAACTTAA ACCGGAGATA
    CTTCCAAAAC TATCCCACTA ATTGCCGGAT TCCGCAGTCT GTTATCGACT
    CTTCTTATTA TGACTTCGCT CAAAGTCAGC TTCCAAAACA TTATCAATTT
    CGAATGTATT TATTTATCTC TTAAAACCAC AAGCCCTAAG TCTTCTGTCG
    AATGTCCATA CATCACGGAC GGATGTGAGA CGTTTTTTTA ACAAACAAAA
    AAATAAAAAT GTGAGACGTC TAGTCGTATA TACAAGAAAA TTATACTGTG
    GATTACCCTT TTAGAAGAAA AATATGAAAA CAATATTCAT TAATAAAGAT
    AATTGTATAA TTAGAAACAA CAATATGATA GGAATGTGGT ACAATTTCAT
    TTGTAATACA GTGGTACATA GGCTGTAAGT ACATGTCAT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25663078 [Map]; Strand: c
      • AT5G64120.1 - [+] show detail - Peroxidase superfamily protein
        Distance: -2076; Region: intergenic
      • AT5G64130.1 - [+] show detail - cAMP-regulated phosphoprotein 19-related protein
        Distance: 1272; Region: intergenic
    Flanking Genome Sequence: 53-2453-1 - 3-prime edge
    CACACGATTG TGTATCTATC AATATTTTCG ATCTGATATA TTTTGAGTTT 
    TTGACCAATA ACTAAAAATT TAATACCTAA CTTGTTTTAG TTTATTTTAT
    ATTTGAGAAT GTATATGTGT TGTATTGGTT ATCATGTTTT TATTTAATAA
    AATAAATTTG ACTTTGATGA ACACCACTAC ATCCAACCAG ACAATTATCC
    ACTGCATGGC CTAACCGATT TTCAGAAAAA AAATAATTTG AGTTTGTTTT
    TGTGCGGAAA AAGAAGTTTT AGACTTTTGT TTTTCAAACA AAATTGATGA
    AATAGGCGAC TAAAAGAGTT CAATTTTTTT TTAAAAAAAA ACAGATTTGA
    AAAANATAGT TGTCGTATGC CTCGATTAAC CCTAACTAGA AAATATATTC
    TTTCTGTATC AAAATGAAAC AATGCTTATG GTTTTGGGAT TTTTGCACAN
    AACTTAAAAA ATCATTTAGT TATTTANAAA AATATATTTT AAAGACTATA
    ACAGTATTGT AGCTGACGTG GCAAGGTGAA AAAGTTGCGA TTTAGGGTTT
    TTGGTTTTTT GCTCAAGTTT GATGCCGCCC GGCGGATTCT CCGCCTNCGG
    TAGGAGACGT AACTGTTCCG GAGCATGTTT CAGTAATACC GGTANAANAT
    GTGAGTCGAG TGGAGACTTT TGAGGNGTCT CANGAANGGG TTTCAAAGGT
    CATGATGGNT TAGGNCGNNA AGNGATCNAA GGGAACCGG

AT5G64120.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Curator Summary
encodes a cell wall bound peroxidase that is induced by hypo-osmolarity
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity; INVOLVED IN: defense response to fungus, N-terminal protein myristoylation, respiratory burst; LOCATED IN: apoplast, cell wall, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT5G39580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64130.1

Model type
Protein coding
Short Description
cAMP-regulated phosphoprotein 19-related protein
Computational Description
cAMP-regulated phosphoprotein 19-related protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: cAMP-regulated phosphoprotein/endosulphine conserved region (InterPro:IPR006760); BEST Arabidopsis thaliana protein match is: cAMP-regulated phosphoprotein 19-related protein (TAIR:AT1G69510.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR