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53-2454-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 104486 [Map]; Strand: c
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2454-1 - 5-prime edge 
    GTAAAAAGTA ATATAACAGA AAAATAAATA TCTTGTCTGA ATCAGAGAGA 
    GAGCTCTCAA CAACCAAAGC TTTGGACTCT CAGGCCAGGA AGACTATGGG 
    ATTGGGCGGC GATCAATCCT TTATTCCCGT CATGGATTCC GGCCAAGTCC 
    GCCTCAAGGA GCTCGGCTAC AAGCAAGAGC TCAAGCGCGA TCTCTCGTCT 
    GTCTCCGCCA CTCTTTCCTT TTTCTTCTTT GATTTGTGTT AGCTAAACAA 
    TTGTTAGATT TCAGGGTCTT CTCCAATTTC GCCATCTCCT TCTCCATCAT 
    ATCGGTGCTC ACTGGTATCA CCACCACCTA CAACACCGGC TTAAGATTCG 
    GCGGCACTGT CACTCTGGTC TACGGATGGT TCCTGGCCGG CTCCTTCACA 
    ATGTGCGTTG GGTTATCTAT GGCCGAGATC TGCTCCTCTT ACCCTACCTC 
    CGGTGGTCTC TACTACTGGA GTGCTATGCT CGCTGGCCCT CGTTGGGCTC 
    CTCTTGCCTC TTGGATGACT GGCTGGTACT CCCTTCTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5992710 [Map]; Strand: w
      • AT3G17510.1 - [+] show detail - CBL-interacting protein kinase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2454-1 - 3-prime edge 
    GCACAGCTAC AATAATCTAC TTCCCCTCTT TCAATAACGG AATTATTAGT 
    AATCTAATCG GAAGATTCAA GCGAGAAATC GATTTGGTTG TCTGTTAATT 
    TGTTGGGAAA TAAATTGAAA TAGGAGA

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G17510.1

Model type
Protein coding
Short Description
CBL-interacting protein kinase 1
Curator Summary
Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
Computational Description
CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 128786 Blast hits to 126868 proteins in 3954 species: Archae - 151; Bacteria - 15250; Metazoa - 47593; Fungi - 12814; Plants - 31341; Viruses - 523; Other Eukaryotes - 21114 (source: NCBI BLink).
Link
InterPro Scan - TAIR