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Mutant Lines
53-2469-1

53-2469-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4009982 [Map]; Strand: c
- AT1G11880.1 - [+] show detail - transferases, transferring hexosyl groups
  Distance: 0; Region: intron1 (CDS)
- AT1G11890.1 - [+] show detail - Synaptobrevin family protein
  Distance: -797; Region: promoter

AGTATGAGCA GACTTACCCC TTCTTGCCTC TGCTTCCTTT CTTCATCTCG 
CTTCTCTCTC GCACAGGTTT TGTAATTTAG ATATCTACCC ATTTGATTCC 
CTACTTTGGT TGTATCATTT CGTTAGTAAC TGATTCTTTT TGGATTCAGT 
TTTTGCGCCT TTGGTTCCAT TGATTGGTCT TTGAGCTGTG ATGGTGTTGT 
CTGGTTCCAC TGTTAGCAAC TTGGCGTTCA TATTTGCTGC TATCTATCTA 
TTTAGGTACT TCTTTGACAT TCATCCAAAA TCGATTATTG TGTCTAGAAA 
TAAGTCAAGT CAAGAGTCTT TTGAGCTCTA CAAGCTAATG GTGTTTGCTA 
TTCACCGTGT CTTACACCAG TCGTTGCTAA CAGGGTTTCA GTTATTGTCT 
TGAAGGATAC TGAAGCATCA T

3 prime edge [+] show sequence

Chromosome: 1; Position: 4010098 [Map]; Strand: c
- AT1G11880.1 - [+] show detail - transferases, transferring hexosyl groups
  Distance: 0; Region: exon1 (CDS)
- AT1G11890.1 - [+] show detail - Synaptobrevin family protein
  Distance: -681; Region: promoter

CTCATACTCG TAGCCACACT CGGTGATTCG GAGAAAATAC ACACTGTCCC 
AGACAACACT GTTTTCAAGA AAATACACAT TGGCTACTAG AAACAGAGAA 
GAATCCTCTT TTTGATACAA GCAAGGAGGA TTCAGTGCAG CGGATGTATC 
GTACAGGTTG GAGTAAGCTC CGCCACAAAA TGGTTAAGAA GAGAACGAGA 
AGTCGCGAGA AGATAGCGTA TTTGATCAAA ATGATTTCTT TCCTTGATTT 
CGAGTTTGAT TCCAAAGCTT TCGCCATTGA TCACGAGCTC GTATTCGAGT 
ATAAAAAGGC AACAGATGGT TCTCGATTGC GAGATTCCGG TGACGATTTG 
TGATTTTCGA TCTTCTCGTC GGAGAAGAAT GTGTTACTCT CTCAACGAGA 
AAGAGAGTTT CAATTTAATT AATGAACCGG CCGGTTCAAT CAGAAGGGAA 
AGTCACTGGC TTTAGCCAAT TGTTCCGGTT TGATTCGGGT CATTAAAG

AT1G11880.1

Model type: Protein coding
Short Description: transferases, transferring hexosyl groups
Computational Description: transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G11890.1

Model type: Protein coding
Short Description: Synaptobrevin family protein
Curator Summary: member of SEC22 Gene Family
Computational Description: SECRETION 22 (SEC22); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: Golgi apparatus, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: SNARE-like superfamily protein (TAIR:AT5G52270.1); Has 1577 Blast hits to 1577 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 548; Fungi - 342; Plants - 449; Viruses - 0; Other Eukaryotes - 238 (source: NCBI BLink).
Link: InterPro Scan - TAIR