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53-2471-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214055 [Map]; Strand: c
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -891; Region: promoter
    Flanking Genome Sequence: 53-2471-1 - 5-prime edge 
    CTGGAGGTAA TCTGGTTCAC ACCATCAAGG TCAAGATTAT CAGCGGATGA 
    TCTCTTCACT AAGCTTTTGT GAGTCTTATG TGTCTTAGCT GTGAGTGGTT 
    TTTATTATGT TACTAATGGT AAAATGTCTA TCTTAGGATT TGGTTTATAA 
    CTAAGGATTT GGGCGTGAGA GATGTTTTCA TGTTGAATTA AGACTTTCTA 
    TATAGAGTTC ATCTCACCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214169 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2471-1 - 3-prime edge 
    NGCANCCGAC CCGATNGGCT CGNATATCAT ATCTGTCAGA NCATCTTNNT 
    TTTGTTCCTT ATGATGAAAC TACCANATNC CTTGACAANG ATGCAACCAT 
    TCTTTTGAAT CTTGATNGCT TTCTCCAATG CTCCCATTTC GTCCACGACT 
    GTTATACGCT CCGGGAAGGT TAAGTCATAG TCCCTTATGA CATGAGCCGG 
    TATGTGCTGC ATCAAGAAAC AAACATCATA AAACAGATTG AGATATTCCT 
    TATTAATTTA TTCACATAAG AATCCATAAC CAAAGATGTT AAATGGAGAG 
    TGTGTAAAGA TCTTAAATAT TCAGGTTTTT TTT

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR