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Mutant Lines
53-2475-1

53-2475-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 18518473 [Map]; Strand: w
  - AT3G49940.1 - [+] show detail - LOB domain-containing protein 38
    Distance: 2998; Region: intergenic
  - AT3G49950.1 - [+] show detail - GRAS family transcription factor
    Distance: -4037; Region: intergenic
Flanking Genome Sequence: 53-2475-1 - 5-prime edge
```
CTTTGGAGGA GCTAGAAAGG ATCAGTGTTG AAGATTTGGG AGAGATCGCT 
GACAAGGACA GTGAAATGGA TGCGGACACA GTGACATTTC ACAGTGACTG 
GTTCCCTCAT CTGCTGGAAC ACATAATCCA CTCTTTCACC TATTGGGTCC 
TACAATAGCT TCTTCT
```

3 prime edge [+] show sequence

Chromosome: 3; Position: 18518357 [Map]; Strand: w
- AT3G49940.1 - [+] show detail - LOB domain-containing protein 38
  Distance: 2882; Region: intergenic
- AT3G49950.1 - [+] show detail - GRAS family transcription factor
  Distance: -4153; Region: intergenic

CTCCAAAGTC TCGTTTAAAT TTACAAAAAA CAGCCTTCGC AAAGGATTAT 
GATTAGCACT TGATTATCTT CGTGACGTTC TCATTAATAA TCATACTATA 
AAACTTGAAT CAATCCGACA TTAGAAGAGT TGATAAAGAT CAAAGACTAG 
AGTTATCTTA TTTTTATATT TTATTTGTTA AACTCTATTT TTGCTTTAAG 
AAAAGAATAT CCTAATTAAG TGTAAATGAA TGTACGGCCA ACAAAAGATT 
TGAAGGGGCA AGATGGCTCT TGGGTCTTCA TCTCCCTC

AT3G49940.1

Model type: Protein coding
Short Description: LOB domain-containing protein 38
Computational Description: LOB domain-containing protein 38 (LBD38); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 37 (TAIR:AT5G67420.1); Has 581 Blast hits to 580 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 581; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G49950.1

Model type: Protein coding
Short Description: GRAS family transcription factor
Computational Description: GRAS family transcription factor; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT5G67411.1); Has 2188 Blast hits to 2164 proteins in 278 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 2186; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR