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Mutant Lines
53-2481-1

53-2481-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 75379 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: -1; Region: promoter
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -141; Region: promoter
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -141; Region: promoter
Flanking Genome Sequence: 53-2481-1 - 5-prime edge
```
CGTTACAGGG CGGGCGGCGA TGGAGCAGAG TCCTCCTCAA AAAAATTCCA 
GTCTTCTTCT TATCACTCGA CCAACGAATT CCAGGCAGNG GCATTGACTA 
TNGCTGCATT TCTTTCTGGG TAAGCCGGGC CTCTCGGTAT AGGCCCAAAC 
CATTCTAAGG CCCAAACCAT TATATTAAGT TGGTNGGTCC ACCAAAGTCA 
GCAGCAGCTA NAACAAGAGC GACTCTGCAG CTGCTCTTCT CCCGCTTCCT 
TCCTGTTAGT TAGCCTCANA GATCCTCGTT CCCCGATAAT GGATTTGGGA 
AAACTGATCC AGCTGTCTGC GCTGCTGNGC CCATTTCTTC TATCATTACA 
CTTTANAATC GCTGGGGCCT CCGCCCACAT NTACTCTTCC CAGCCCTTCC 
ACNATGTCGG TAATTCTCTC CTCCTCTACG GGGGCAGCGA GGGCATCTTC 
GCCTCTTCCC GATCTTTAAT CAGGTATATT C
```
3 prime edge [+] show sequence
1. Chromosome: 2; Position: 75259 [Map]; Strand: w
  - AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01060.2 - [+] show detail - myb-like HTH transcriptional regulator family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT2G01070.1 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -261; Region: promoter
  - AT2G01070.2 - [+] show detail - Lung seven transmembrane receptor family protein
    Distance: -261; Region: promoter
Flanking Genome Sequence: 53-2481-1 - 3-prime edge
```
AACCCACCGG ACTCAGTAAA CTAGTCTGTA ACACAATATC TTCTATTTCA 
GATAAGATTT AGCTTGGAGA AGAGCAAGTT CCGAAAATGG AGGGGCAGTC 
GTGTATAGAT CCACCACCCA CAGGTTCGTA GATTCCATAA CCTTGGATTG 
TGTTTTCTTT TTGCTTTCTC GGCGACAAAT TCCTCCGATT TTAGTGAACA 
TGTCTCTGAT TTTGGTGTCC TGTGGTGGAT CTGCCGGAGC AAGTCTTAAA 
CTTGACTTGG ACTGTTTTTA CTAGCTAATT CTGGGCGCTA TTTCGTCTTC 
CTTGTTTCCA TTTCTATCTC TTTCTCTCTG GCCAGTCCTC ATATGTTATC 
ATTTCCTAGC TTTGCCACTA CTCATTACTT TCCCTTTATC GTGTTCATCT 
CCCTCGAC
```

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.2

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT3G13040.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.1

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01070.2

Model type: Protein coding
Short Description: Lung seven transmembrane receptor family protein
Computational Description: Lung seven transmembrane receptor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane receptor, eukaryota (InterPro:IPR009637); BEST Arabidopsis thaliana protein match is: Lung seven transmembrane receptor family protein (TAIR:AT1G72480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR