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Mutant Lines
53-2482-1

53-2482-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 717238 [Map]; Strand: c
  - AT4G01680.1 - [+] show detail - myb domain protein 55
    Distance: 0; Region: intron1 (CDS)
  - AT4G01680.3 - [+] show detail - myb domain protein 55
    Distance: 0; Region: intron1 (CDS)
  - AT4G01680.2 - [+] show detail - myb domain protein 55
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-2482-1 - 5-prime edge
```
GCTGGAGCTC TGTCCCTAAA CAAGCTGGTA CAGTTCCAAA TTCATCTTTT 
GTTTGGTTAA TTATAGATTC TTGAATTTGA AAATTTTGTT TAAATCTTTT 
GTATAGGTTT ACAGAGATGT GGAAAAAGTT GTAGATTAAG ATGGATAAAT 
TATTTAAGAC CAGATTTGAA GAGAGGAGCA TTTTCTCAAG ATGAAGAAAA 
TCTCATTATT GAACTTCATG CCGTTCTTGG CAATAGGTAA AGAACTTCGT 
ACCGTTCTGT TTCATCTCAC CTCG
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 717354 [Map]; Strand: c
- AT4G01680.1 - [+] show detail - myb domain protein 55
  Distance: 0; Region: exon1 (CDS)
- AT4G01680.3 - [+] show detail - myb domain protein 55
  Distance: 0; Region: exon1 (CDS)
- AT4G01680.2 - [+] show detail - myb domain protein 55
  Distance: 0; Region: exon1 (CDS)

GCTCCAGCAA CCATGACCGT ACTTAGTGAT GTAACGAAGA AGCTTCTCAT 
CTTCTTCAGG AGACCAAAGT CCTTTCCTCA GTTTCTGTTT GTAACAACAT 
GAATGTCTTC CCATCTATAT ATATATGTAA ATAAAATACT ACANAGAATC 
NATTCAAGAT CGATCGTTTT TGTGTGTTTC TTCTTCNGAG GNAGTTTATG 
AAGTCNGCTT NCAGAGAAAT CTTTAGTNCA TAATANGAGG CGNGAGAGAA 
AGATNGAGTG AGNNTGGNGA GANAAAATGA NGNTTGGNNA GAAANAANAA 
GCGGATNTAA NCNNTGGGGN GNTTGANTGN AATAATATGG NTTTATNNAA 
ANAAAAATAN ATTNCACTTT GCGTACACTA ATTACTTATT CTACANTACT 
ACCAAACAGA ACCAAATTTG GTTTTTGACT AGAGTAAACT TCAACGTACC 
GAAACAAAAA CCCTTTTGTT TATATTCCCC AAATCCTCCT NTCCTTTTNT 
CATNTTCTNA CTTNAAACTC TNTNTATCTT TCTNTCTCNC NNNNNTTNGA 
ACTAAGATTT NTNTGAAGGC TGACTTNATA AACCTTTNNG GGGAGGAGGA 
ACACNCAAAA NCGANNGANN NGGANGNGGG GNGGGGGNGT NTTTNNTTTA 
NAAAAATAAT TNTNNGGGGG AAAAAAAATN TNNGGGGGGG NTTCCCNCCN 
NNNNNNAGGG GGGGGGGGGG GG

AT4G01680.1

Model type: Protein coding
Short Description: myb domain protein 55
Curator Summary: Encodes a putative transcription factor (MYB55).
Computational Description: myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 8918 Blast hits to 8213 proteins in 473 species: Archae - 0; Bacteria - 0; Metazoa - 751; Fungi - 506; Plants - 5859; Viruses - 3; Other Eukaryotes - 1799 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01680.2

Model type: Protein coding
Short Description: myb domain protein 55
Curator Summary: Encodes a putative transcription factor (MYB55).
Computational Description: myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01680.3

Model type: Protein coding
Short Description: myb domain protein 55
Curator Summary: Encodes a putative transcription factor (MYB55).
Computational Description: myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR