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53-2495-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29417389 [Map]; Strand: w
      • AT1G78180.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2495-1 - 5-prime edge 
    GCTGCCATGG TTTCAAAGTA TACATATTAT TGAATCAGAG CGCATATAAC 
    TTGTTTGATG AAATGCCTGA ACCAAAACCA TGATTTTTTG TATTGGTATT 
    AATATTACAC TTTTTGTTGT TGATGATGGC AGAACATTCT TAGCTCCACT 
    TGAGAGACTA AAGCTTGAAT ATACAGTTCG TGGTGAACAG AGGAACTTGT 
    TGGTGGTTGC TAAGTCAATT GCAACTACAC AGGGCTTGAC TGGATTCTGG 
    AAAGGTAATT TGCTCAATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29417313 [Map]; Strand: w
      • AT1G78180.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2495-1 - 3-prime edge 
    ATTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATTA 
    CAGCACCAGC CCAGAGATGC TTCCTTGTGT TCATGGTCCC GCGTCTCCTC 
    ACGCCACCGA TAACACTTCG TTTTCGATTA TCCTTGCCGG GAATTTCGTC 
    GTTTCGCGCC AAAGCCTTCT TACATTGCTG CTCAGATCTG TCTTTACTCA 
    AGCTCACGGA CAGGAACATA AAGTTCTTAC CGGAGCGGAG ACGGGTTTTG 
    TTTCTCCAGT AACCGGGGAA ATGCAGTGGC TCTGAGTCGG AGCATTTGGA 
    GGAGATAGAG TCGAAGAAGG AAGAGGAAAC GCCTGGTGGT TCGAGAAACA 
    GACCACCGGT GCTGAAGAAA GCT

AT1G78180.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G64970.1); Has 23010 Blast hits to 13205 proteins in 452 species: Archae - 0; Bacteria - 0; Metazoa - 9903; Fungi - 6601; Plants - 4239; Viruses - 0; Other Eukaryotes - 2267 (source: NCBI BLink).
Link
InterPro Scan - TAIR