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Mutant Lines
53-2521-1

53-2521-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 24211785 [Map]; Strand: w
- AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
  Distance: 61; Region: intergenic
- AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
  Distance: 86; Region: intergenic

CTTGAGAGAC TACAAATTTG TATAGATCTG ATAAGTTTTA GAAATTAAAA 
ACTCTTACAT TAATTCAATA CACCACAATA ATCTTGATTT AACTCCAAAA 
CACGTAACTA AAGACAGAGA GATGGAGAGA GAGAGAGAGA GAGAGATATA 
AATAATCATC CACTGATANT GTGAATCTTG ANTGTNNGAA CCNGGTTATT 
ATCACCAGTC TTCTTGATCT CANATATCAT CTTATCCGGT GTCTTCACTT 
TATTCCTTNT GANGATACTG CCAAATCCCT TGACANACAC ACTACCATNT 
GTCTGAATCT TGATCTGCTT CTCCANTGTC CCGAATTTTT TCACAAGTGG 
ATCGACAAGA GNGANACTCT CNGGGAAGNG CNAGTCATAG TCTTTGATNA 
CCCGNGCTGG GATGAGCTGC TTTATGAAAA AANACATNAT AAANACTCAC 
ANCCCAACGA TGTTAANTGA AAAGCTCTTT CACATTCAGT TTTTACTNAC 
CAGNNGGCTT TTNTTCTTCG GATTAGGGAT CAGAGTAAAA GATGGGTTCT 
CACGATCATN CAGATACTGT CTTTCATCTT CATCATCATC ATCAGCCTTA 
GCNTGATCTC TAGAATCAAA AGCCTCAACA TAATCATNAT CTTCAACANG 
AACATCATCA GCATCNTTAT CAACATCTTT NTCATCAGCA TCATTATCAT 
NTTTCTNGAC AGCAN

3 prime edge [+] show sequence

Chromosome: 5; Position: 22689285 [Map]; Strand: w
- AT5G56030.1 - [+] show detail - heat shock protein 81-2
  Distance: 0; Region: exon3 (CDS)
- AT5G56030.2 - [+] show detail - heat shock protein 81-2
  Distance: 0; Region: exon3 (CDS)

GCTCAGTCCA AGCTTCAGCA TCCTGTGGAT CCTGCTTCCG AAAGTGTTTG 
GCTCATCAAG GCTGAAACCA GAAGTGAGAA GAGCGGTCTC AAAGAGGAGA 
AGCACAAGGT CCTTCACAGA CTTGTCGTTC TTGTCTGCGT CAGCTCGCTT 
TCTCAACTCA TCCATGATGG AGTTCTCTGG ATTAATCTCC ATTGTCTTCT 
TACTCGACAT GTAACCAGCC ATGCTGCTGT CTCTCAAGGC TTGAGCTTTC 
ATGATCCTCT CCATGTTTGC AGTCCAGCCG TATTCGCCGG TTACAAGACA 
GCACGGTGAG TCCACAACAC GGTCAGAAAC AATAACCTTC TCGACCTTGT 
CACCCAAAAC GTCTTTGATC ACTTTGCAGA GTCCTTCAAA CTTCTCCTTG 
AGCTCTTCTT TCTTCTTC

AT5G56030.1

Model type: Protein coding
Short Description: heat shock protein 81-2
Curator Summary: A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.
Computational Description: heat shock protein 81-2 (HSP81-2); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: heat shock protein 81-3 (TAIR:AT5G56010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G56030.2

Model type: Protein coding
Short Description: heat shock protein 81-2
Curator Summary: A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.
Computational Description: heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1).
Link: InterPro Scan - TAIR

AT5G60120.1

Model type: Protein coding
Short Description: target of early activation tagged (EAT) 2
Computational Description: target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60130.1

Model type: Protein coding
Short Description: AP2/B3-like transcriptional factor family protein
Computational Description: AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR