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Mutant Lines
53-2527-1

53-2527-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26465642 [Map]; Strand: w
- AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -530; Region: promoter
- AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -562; Region: promoter
- AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -562; Region: promoter

CCCAAAAGTA CTATAACCCC ACTGATACTT ATCACAGCGA AGCCGTGGCT 
GACTGTATCA AGTTTATCAG AACCAAGAAG GCCATCATCC ACCAGGAAAA 
CGTCCCGTAA CGCCCTTAAT TCTTATATTC TTCATTGTCA CCTCTTATTT 
GATTAGCAAA TTATAATTGG TGGAATAAAA GCTACCCTAC GTGTATACGC 
CTTGCTTAAT ATTTTTGGGA TTATATATTA GTATTAATCA TTTTCTTAAG 
TTACTCTTCA GTCTTCATAA GTTGACATCA AAACAAATCA TTACAAATTT 
ACGACCAACC TTTTTATAAT ATCCTGTACC GTAAAAACGA TTACTAAAAG 
AAGAATGAAT GTATGTTACT GTATTAGTTA CCAATATAAT ATGCATCGTG 
TAACTTCAAA TTTGGTATAG TGGTAGTTGT AAATATTGGT TATCATGTTC 
AAATATTGTA ATAAGTTTGT AACAAGTTGA TGGTAAGTCA ACGATCCACG 
GCTTTGCTGG ATGTTGGAAT GGAGAAGCGC ATCATTTGGG CCCATATTTA 
AAAGCCCAAA CTCAAAAAGT TGGCCCAAAT AGAAAATCGT TGGCATCAGT 
TAAGGCGGTG GAAGACGTCG ATCCCTAAAG TCGAAGCCCT TGTTAGGGCT 
TCTATCCATC ACCGGCGATA TTGGTTTACG CGTCGGAGAG ATGGTTGGTG 
AGTG

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26465532 [Map]; Strand: w
  - AT5G66240.3 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -640; Region: promoter
  - AT5G66240.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -672; Region: promoter
  - AT5G66240.2 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: -672; Region: promoter
Flanking Genome Sequence: 53-2527-1 - 3-prime edge
```
CTTTTGGGTC GGCGTCTGTC TGGTATGAGT ATGACGGCGA GATGTGGACT 
TGGAGACGGC AGAGATCATG ATGAGGCGGA GAACAGCTTC GCGAAAACGG 
TCCAGGAGAT TCAGATCACT AGTCTCCCGA TTACCAGTGG CCTCTGGAGT 
TGGTTTTTAC ACGGGGGACA CATCCGGCGC CAGAGTTCTT GGTCTTCATC 
TACAAGCTGC TCTGATGATT AAGTGTTTCC TTCCTCTTCA GCTGTCGCAT 
GTGGGGGTTT TATTTATACA CGAGAATCTA ATTATAATCC AAGGGAGGCG 
CAGTTTTATT GTCAATTAGT CTTGTCTTTT GCATATTT
```

AT5G66240.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 21938 Blast hits to 12469 proteins in 522 species: Archae - 46; Bacteria - 4852; Metazoa - 7701; Fungi - 4572; Plants - 2085; Viruses - 0; Other Eukaryotes - 2682 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.2

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66240.3

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G14530.1).
Link: InterPro Scan - TAIR