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53-2535-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 135662 [Map]; Strand: w
      • AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon6 (CDS)
      • AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon5 (3UTR)
      • AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
        Distance: 0; Region: exon5 (3UTR)
    Flanking Genome Sequence: 53-2535-1 - 3-prime edge 
    AAGGCAGTGA ACAATCAATG AGCCTTACGC AACCAAGGGA GAGCGAGAAG 
    ATGTCATTGC CTGTGTTTGG GCTTGCTTCA TACAAGTTCA GAGGTTCATT 
    ATGGACACCC ATTGGGGGTT CGGAGCACCA GCTCGTGAAA TCTCTGTTCC 
    AAGCCGCTGA CAAATGGCTG CATTCTTGTC ATGTCAGCCA CCCTGATT

AT2G01260.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.2

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01260.3

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR