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Mutant Lines
53-2539-1

53-2539-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 3523148 [Map]; Strand: w
  - AT5G11080.1 - [+] show detail - Ubiquitin-like superfamily protein
    Distance: -3699; Region: intergenic
  - AT5G11090.1 - [+] show detail - serine-rich protein-related
    Distance: -1532; Region: intergenic
Flanking Genome Sequence: 53-2539-1 - 5-prime edge
```
GTTATACCTT TAAGATAGCA TATAAATGTT CTAATACATC AGAATAGTGT 
TCGAGTCAGT AGTTCCATCA ATTTGTAGGG ACTCTTTAGG TCTAATATGA 
AACACAGTTG CATGGATCTC CTCCACCGTA ACAACTTTAT ACCAAATGCT 
AGATTCGTTG TTGTTGTTAC ATTGCTTTTA AGCCCATTCA AGAGTTTGGC 
TAACTCACCA GTAGGTTTAA GGTGAAAAGT TGTTGAAATA TGTTAAGTG
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 3523032 [Map]; Strand: w
- AT5G11080.1 - [+] show detail - Ubiquitin-like superfamily protein
  Distance: -3583; Region: intergenic
- AT5G11090.1 - [+] show detail - serine-rich protein-related
  Distance: -1648; Region: intergenic

GGTATAACAG CTTCTCTGCA GAAGGAATTT GGTGATGAAC TCAACCATAG 
TAATAATATA TGTCTTATTC CAATGCAGTC CTTAACCGCA AAATACAAAA 
TATGCTTAGA CAGATTATTG CCAGTAATAG TTTTGGTGCA GAATATCAAT 
TTTAAGAATT TGATGGATAC ATTTCAGAGA GTTCTTACCA ACTAAACCTT 
TAAACACGGT TTCTACAGAT ATTAAACGTT TGACGGTCAG AAACGACCTA 
TATTTTGTCT AATTTGATTA AATATTTAAG AGAGAATTAT GATTGAGATT 
ATTAATAAGG TCTGATCTAC TCGTTTCACA TTTTGTCTAA ATTGGNCTTG 
ACAGAATCCA TATTTTGTGT GTAATTAA

AT5G11080.1

Model type: Protein coding
Short Description: Ubiquitin-like superfamily protein
Computational Description: Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G11090.1

Model type: Protein coding
Short Description: serine-rich protein-related
Computational Description: serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR