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Mutant Lines
53-2562-1

53-2562-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26411026 [Map]; Strand: c
- AT5G66030.1 - [+] show detail - Golgi-localized GRIP domain-containing protein
  Distance: -771; Region: promoter
- AT5G66040.1 - [+] show detail - sulfurtransferase protein 16
  Distance: 0; Region: intron3 (CDS)
- AT5G66040.2 - [+] show detail - sulfurtransferase protein 16
  Distance: 0; Region: intron2 (CDS)

GCCACCGACG ATATCTTTGA CTCCCGTGAA ACCCTGCAAA TTCCCAAATT 
ATATATCACC AACAAAGTAA AAGTCAGAAA GAAGAGCTTT GTGGTGGAGC 
TTACTGCATT GAGAAGATCG GTGGTGGCTT TGATAGATCT GCCACCGCTC 
CGGCAGCCTA CAATGATGTC GTCGGATTGT CCAAAATGGG AGGAGACTTG 
TTCCAGGAAG TCGGGGTTCT TTGACATCCC TGTTTCACAA TCACAAAACT 
ATATCCATCA CAACCCCACT CAATTACCAA CTAACCAAAT AACAACATAC 
CTGATGCTCC TTGATTCATG TAAGGCACGT TGATCGCCCC ACAGGCATGT 
CCTTGACTGA ACTCTTCTGG AGTCCTATAT TCATCATCCC CATTACATCA 
AGATCCTAAT GATGCTATGT TGATGATTGA AATTGTCAAA AGAGACAGGT 
GGGGCGTTAC CTGACGTCTA GATAGCGGTG GCCGGCTAGA AGAAGGTCGT 
GGGCGACTGT TACCGACACC GATGATGGGA CTCTGCTC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 26411142 [Map]; Strand: c
  - AT5G66030.1 - [+] show detail - Golgi-localized GRIP domain-containing protein
    Distance: -887; Region: promoter
  - AT5G66040.1 - [+] show detail - sulfurtransferase protein 16
    Distance: 0; Region: exon4 (3UTR)
  - AT5G66040.2 - [+] show detail - sulfurtransferase protein 16
    Distance: 0; Region: exon3 (3UTR)
Flanking Genome Sequence: 53-2562-1 - 3-prime edge
```
TCGGTGGCTA TAGTGCCTGG GCCAAGAATG GCCTTCCTAC AAAAGATTGA 
TGACTCACCA AATGTCTTTC CTTATCTCTT CGTCTTCTTC TTCTTCAATA 
ATGCATCCTT TCCGCATGTA ATCATCAATA AATGACCCTC CTTCTCCTTG 
CTGTCTGATG TGATAGCTTG GAGGGANNGG CTCATCGCAT CTTTTTAAAA 
TATATAAAAA TACAAGTGTG TGTTGATTGC ATCGAAATCT CTATATATAT 
AGTTTAAAAA AAAAATCA
```

AT5G66030.1

Model type: Protein coding
Short Description: Golgi-localized GRIP domain-containing protein
Curator Summary: Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.
Computational Description: ATGRIP; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), GRIP (InterPro:IPR000237); Has 226787 Blast hits to 107130 proteins in 3750 species: Archae - 2735; Bacteria - 54789; Metazoa - 91225; Fungi - 18234; Plants - 12767; Viruses - 906; Other Eukaryotes - 46131 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66040.1

Model type: Protein coding
Short Description: sulfurtransferase protein 16
Curator Summary: Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo.
Computational Description: sulfurtransferase protein 16 (STR16); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT4G35770.1); Has 3621 Blast hits to 3614 proteins in 1089 species: Archae - 47; Bacteria - 2736; Metazoa - 68; Fungi - 45; Plants - 236; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66040.2

Model type: Protein coding
Short Description: sulfurtransferase protein 16
Curator Summary: Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo.
Computational Description: sulfurtransferase protein 16 (STR16); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT4G35770.1); Has 254 Blast hits to 254 proteins in 60 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR