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53-2574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208295 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2574-1 - 5-prime edge
    CTCCTTTCAG TATCTCAAAT TGAAACTTGA CCGTTCGTGT AGAGCACAAC 
    TCATCTTCAC CATCTATACA GCTAGAAGCT TCAGCATTAA CAACAGAAGA
    GTTCGACGTC ACCGATTCAT CCATCTGATT CAAAGAAACC CCTTTAACAG
    TAATCGAATC TCGTTCGTTC TGAGTAGACT CGGTCGAGTC GACGTCGAGA
    TTGAGATCCA GCATCAATCT CAAAAAAGTC AACAAAAAAA GCAAACAAAA
    CTCTGAGCTT TCACAACAAC AACAAAAACT ATTTCTTCAA GCTCTTACTT
    ACACATTGAT CAATAAATTC AACGATCGCC GTCGATTTGA AATAAACAGA
    GCTCATAAAT CACATTACAT AGGTGAAAAT CAGCACGAGT ATGGAGAAAT
    CAAACGGAGA TTTAGATTCT GAAATCAATC AAAAACACGA CGGAGGAGGA
    GAAGGAATAA TAACCAAAGA GAAAGAAGGA AAAAGCTCAA TCACTAAGGA
    GAGAAATGAG ATTGAGGAGA CATGGAGATG AAGAGTTGAG TATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208408 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2574-1 - 3-prime edge
    GAAAGGAGGA GGAGAAGAAG AAGAAGAAGA AGATGATGAT GAAAGAAGTG 
    CTGTGATGAT GACTAAGGAG TTTTTTCCTG TTGCTAAAGG CATGAACTTT
    ATGGATTCGA GCGCTCAAAG TTCAAGGAGC ACCGTTGATA TTTCCTTCCA
    GAGGGGGAAA CAAGGTGGAG ACTTTATAGG TAGCGGGAGC GGTGGTGGCG
    ATGCTTCACA GGGTGATGCA GCCACCATCA CAGCCGGTGA AGAAAAGCAG
    GAGAGGTCCT AGGTCTAANA GTTCTC

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR