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53-2574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208295 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2574-1 - 5-prime edge 
    CTCCTTTCAG TATCTCAAAT TGAAACTTGA CCGTTCGTGT AGAGCACAAC 
    TCATCTTCAC CATCTATACA GCTAGAAGCT TCAGCATTAA CAACAGAAGA 
    GTTCGACGTC ACCGATTCAT CCATCTGATT CAAAGAAACC CCTTTAACAG 
    TAATCGAATC TCGTTCGTTC TGAGTAGACT CGGTCGAGTC GACGTCGAGA 
    TTGAGATCCA GCATCAATCT CAAAAAAGTC AACAAAAAAA GCAAACAAAA 
    CTCTGAGCTT TCACAACAAC AACAAAAACT ATTTCTTCAA GCTCTTACTT 
    ACACATTGAT CAATAAATTC AACGATCGCC GTCGATTTGA AATAAACAGA 
    GCTCATAAAT CACATTACAT AGGTGAAAAT CAGCACGAGT ATGGAGAAAT 
    CAAACGGAGA TTTAGATTCT GAAATCAATC AAAAACACGA CGGAGGAGGA 
    GAAGGAATAA TAACCAAAGA GAAAGAAGGA AAAAGCTCAA TCACTAAGGA 
    GAGAAATGAG ATTGAGGAGA CATGGAGATG AAGAGTTGAG TATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208408 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2574-1 - 3-prime edge 
    GAAAGGAGGA GGAGAAGAAG AAGAAGAAGA AGATGATGAT GAAAGAAGTG 
    CTGTGATGAT GACTAAGGAG TTTTTTCCTG TTGCTAAAGG CATGAACTTT 
    ATGGATTCGA GCGCTCAAAG TTCAAGGAGC ACCGTTGATA TTTCCTTCCA 
    GAGGGGGAAA CAAGGTGGAG ACTTTATAGG TAGCGGGAGC GGTGGTGGCG 
    ATGCTTCACA GGGTGATGCA GCCACCATCA CAGCCGGTGA AGAAAAGCAG 
    GAGAGGTCCT AGGTCTAANA GTTCTC

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR