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53-2581-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134285 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -241; Region: promoter
    Flanking Genome Sequence: 53-2581-1 - 5-prime edge 
    CAGCAATATA TTTATCTTCT TGTATATAAA TAAATAAAAA TATGAAAAAT 
    GTATGTTATA TATGTTGCCT TCGCAAACCA AAAACAAATT GGGGTGTTTA 
    TCTAATCCTA TATAGTATAC CGGAACATAT TGTCCGTTCC GTGCCATACA 
    AGGTCCTCCT CTGTGTCTCA CATGTGAAGT TAGGAGGCTT TTTTCGCTAA 
    CAGCTAACAT GCTTGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134459 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -67; Region: promoter
    Flanking Genome Sequence: 53-2581-1 - 3-prime edge 
    ANTGAAAACG GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC 
    CGCTGTCTTC CGGTTCGACT TCGTGATCTC ACCAAAGAAA CACGCAAGAT 
    CACTTCCATC GATCAATACA TGGATACATC AGCAGTACAA CTACCCTTTC 
    GCGATTATTC TCTTCAACCT GCTCCTCGGT ACATCAACGC TAGATGTCAT 
    ATCTGCTCTG TAACAGGTGC CATCTACAAC GGCTACTTTT GCAATGATCC 
    TATTGTTTGG ATGCATAAGG AGTGCGTTGA GCTCCCATCT GAGATCAACC 
    ATCTTTTCCA CCCCCAACAT CCTCTCTTGC TCACATATGA AGAGGGATGG 
    TGGAGTTGTT TCTGTGCTTT GTGTGGAGAA ACAAAGCCAG CGAAGTACTT 
    TTATAGTTGT TCCACATGTA AAATCAAGGT GGATTTGACT TGTGGGATGA 
    ACCCACCACC GCCAGCTATT GAACATCCCA TCTGCCATGA CCATCCACTT 
    GTCTTCCTGA AGAAAAGACA GGAGAAAACC CCTTGTGAAG TTTGCAAGAA 
    TAGAATTATT GGATCATCCT ATTCATGTCT TGGATGCGAG TTGTACTTCC 
    ACGTGGGCTG CATCCATCTC TCGAAAGAGG TAAATCATCC TTGGTCACTC 
    TGATCATCCT CTCATGCTCG TCGAATCTGA ATCACTTACA GATAATGATA 
    AGAAGACTTG TTTTCTATGT GGGCAACAAC CGCATGGTAT TCTTTATCAT 
    TGGTCTATCT GCAACTTCAC ACTGTGCATT GGT

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR