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53-2614-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9027877 [Map]; Strand: c
      • AT2G21045.1 - [+] show detail - Rhodanese/Cell cycle control phosphatase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2614-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCTCGA TCATATATTA TCAATAGCAA GTAATCAACT TACAACTTAC 
    AATTATACAA CTTGATCATG TGTATTTATT AACTTAATCG AGTTGAGATA 
    TTATAGAAAT TAATATAGAA GTTGACCAAC TATTATTTTA TTATTTTGTA 
    ATGATCGTGA AAGTTGAAGC TAGAGAAAGA TGATTTAAGA ACAAATCTCA 
    AATCAGTTTA TGAGTTTTAA ACAAATTGGT AACCATAAGA AAGTACTAGA 
    CCACAACTAT AAAATTATTA ATGTCAAGAA GAAAGCGGGT CTCACGATTT 
    ATATATGCAT TTCAAAAGTC GCAATATTTC AGGATAAGAA TCCAAGAACA 
    AGTTTTCCAA GGAATAGTGG CTTTTGCAAG GAGAAACAAC TAGCCCAACA 
    CATGAATACT AATGTAGTTG AGTTGATAAC ACATGAATAC ACATGAATAT 
    GCGTTGATCT CGATCATATA TTATCAATAG CAAGTAATCA ACTTACAACT 
    TACAATTATA CAACTTGATC ATGTGTATTT ATTAACTTAA TCGAGTTGAG 
    ATATTATATA AATTAATATA GAAGTTGACC AACTATTATT TTATTATTTT 
    GTAATGATCG TGAAACTTGA AGCTAGAGAA AGTTGATTTA AGAAAAAATC 
    TCAAATCAGA NGGTCGACCC TGAGATTTTA GAGGCTCACA CCGACTNCTG 
    ACGAACCGGC TNCTTGACGA ACCGGCTCCT GACGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8979049 [Map]; Strand: w
      • AT2G20850.1 - [+] show detail - STRUBBELIG-receptor family 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G20860.1 - [+] show detail - lipoic acid synthase 1
        Distance: -530; Region: promoter
    Flanking Genome Sequence: 53-2614-1 - 3-prime edge 
    AGGGATGAAA GTCTTACCAA TCCTGACGAT GGTAAGCCCC TAATTCTCTC 
    TGTTTTTCCC TTTTGTGTAA TGGTAATGTT AGTATAGCTA ATCGTACCCT 
    GATTGTTTGC TTTAGTTGCA GGCTATTAAC AGTCTCTTCC TTGCACNTGG 
    AGTCTCCTCT TCTCCCCGGT TGGGTTGCAT CTGGAGGTGA CCCATGTGGT 
    GAGAGCTGGC AAGGTGTTCT ATGTAATGCT TCCCAAGTAG AAACAATGTA 
    AAAAACGACA CCTCCCATCT TCTTCTTCTT ACTTTTCTTT ATCATTCTTC 
    TAACAACACT CTCACCCTTT TTCAGAATTC TCATCAGTGC CAATCTTGGA 
    GGAGAGCTTG GTGTTGGCTT AAACATGTTT ACCTCTCTTA AAGCAATGTA 
    CTTTATCCTC TCTTGCGTTT ATGACTTTTG CTTCTTTAAT CTGCTTCTCT 
    CCTTATTTT

AT2G20850.1

Model type
Protein coding
Short Description
STRUBBELIG-receptor family 1
Computational Description
STRUBBELIG-receptor family 1 (SRF1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 3 (TAIR:AT4G03390.1); Has 150345 Blast hits to 104966 proteins in 4098 species: Archae - 89; Bacteria - 11039; Metazoa - 39266; Fungi - 7103; Plants - 77215; Viruses - 282; Other Eukaryotes - 15351 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20860.1

Model type
Protein coding
Short Description
lipoic acid synthase 1
Curator Summary
LIP1,Lipoic acid synthase,
Computational Description
LIPOIC ACID SYNTHASE 1 (LIP1); FUNCTIONS IN: lipoic acid synthase activity; INVOLVED IN: lipoic acid biosynthetic process, glycine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Lipoate synthase (InterPro:IPR003698), Elongator protein 3/MiaB/NifB (InterPro:IPR006638), Radical SAM (InterPro:IPR007197); BEST Arabidopsis thaliana protein match is: lipoic acid synthase family protein (TAIR:AT5G08415.1); Has 5683 Blast hits to 5683 proteins in 1186 species: Archae - 36; Bacteria - 2370; Metazoa - 113; Fungi - 91; Plants - 53; Viruses - 0; Other Eukaryotes - 3020 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G21045.1

Model type
Protein coding
Short Description
Rhodanese/Cell cycle control phosphatase superfamily protein
Computational Description
Rhodanese/Cell cycle control phosphatase superfamily protein; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: sulfurtransferase 18 (TAIR:AT5G66170.3); Has 3150 Blast hits to 3144 proteins in 1047 species: Archae - 52; Bacteria - 2382; Metazoa - 28; Fungi - 31; Plants - 181; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).
Link
InterPro Scan - TAIR