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Mutant Lines
53-2618-1

53-2618-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 73112 [Map]; Strand: c
- AT2G01050.1 - [+] show detail - zinc ion binding;nucleic acid binding
  Distance: -3228; Region: intergenic
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 146; Region: intergenic

GGCCTGGAGA TGATCTCAAA ACAGAACATT ACAAATTATC ACGTTAGTGA 
AGCCTGCACC GTTCTGAAGG TTTGCATATT TGCTGGTGCC TTGATAATAA 
AGACTGGTGA TGCGATCTCG AATGGTCTTG TCGATGACNG GTAATGAGGT 
GAGTGCACNG GGTTGTGTTC TTTATGGTAT TTTCTAGTGT TACGTTCTCT 
CCAAACGTTG TATTTTACAG TTCTCATATA TTAAATTTCT CAAATATAAA 
TAAACTATTT TGGATCAACA AAATAAAAAT TTAATATTTT CTAAGAAACA 
ATGTTGCTTT CATATAAAAC ACTCTTTCTA CTATAAGAAA ATACTTAGTA 
TATCAGTGTA ATAAGGAACT TTTTGAATTG ACAACTTATA TTTTATTTTG 
GGAATGTGAC ACGTTTACAC ACTTTTACAA AATCTTATTC TTTTTGAGGC 
ACTTTTCAGG GATGAGGCAC TTTTCTTTGT TTTTGGAGGT AAAAAGGACA 
ATTATATCCT TTCCAAATAA CTGTCTAATC ACGTAATATT TTCTTTAAAA 
AGAAATGGAA T

3 prime edge [+] show sequence

Chromosome: 2; Position: 73226 [Map]; Strand: c
- AT2G01050.1 - [+] show detail - zinc ion binding;nucleic acid binding
  Distance: -3342; Region: intergenic
- AT2G01060.1 - [+] show detail - myb-like HTH transcriptional regulator family protein
  Distance: 32; Region: intergenic

TCTCCAGGCC TAGCTAACTT TATGCTAGGT TATTCAGCTG TGTATGTTTA 
AATGCGGCAT GCAGTTACTG TTTTGATAAA GTAGCTTTAG AAGAATGTAG 
TGTGTTGGGA ATAAGAGTAA TTTTGTTTTG TGTTTACCAA ATTACAGCAC 
AACACAGACA TATTCATTCT TCATGCTCGT GATAGTGCCT AGAGAATTAA 
CGACTTGTGA TCACATTATT AGAGGAAACT CCTAACTAAT AAGGATTAGG 
ATAAACAACA CTACATGTGG TACACTCAAC AACTCAAAGA TTATCTCCTG 
AAACCTTATC CAACTGTTCT TCGGCCCCAA GCAGTGATGT AGATGGCTGG 
TCAAAGGCGA GGACATGGTC TGACTGATGG TAAGAAGTGT TCAAGCCTGA 
TTCTAGTATT GGGTGACCCA CTACAATATC AGGTGTATAA CCAGCTGCAC 
CTCTCACCAA TCGAGGCTTC TTTGATAATC TCTCCTCTCC TGT

AT2G01050.1

Model type: Protein coding
Short Description: zinc ion binding;nucleic acid binding
Computational Description: zinc ion binding;nucleic acid binding; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G31430.1); Has 369 Blast hits to 365 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 367; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01060.1

Model type: Protein coding
Short Description: myb-like HTH transcriptional regulator family protein
Computational Description: myb-like HTH transcriptional regulator family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT3G04450.1); Has 1678 Blast hits to 1660 proteins in 60 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 1660; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Link: InterPro Scan - TAIR