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53-2622-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19277050 [Map]; Strand: c
      • AT2G46915.1 - [+] show detail - Protein of unknown function (DUF3754)
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2622-1 - 5-prime edge 
    NGTCTGGTGG TGATTCATCG GGTGATGAAG AAAGTTCAAC TTCAGATGGA 
    GAAATTGACT CAGAGGAGGA ACTTAAGAAC TCTGAACCTA GGAGTGTTAA 
    TGGATACGAA GGTTTATCAT TCCCTTTGGC TGATGGTTTC GACATTTGGA 
    ACTTTTTAAT TTCCTCTGGC AAACATGCAA AGAAACGTTC CGCTGAAAGG 
    TATTAGAACC TATCACTGAA GTCTTTCATT GATAGAAGAT TTGAGATTGG 
    TGTTTTGAAA ATCTGAATAT AACTTGACAA TACTCTAATG CAGTGTAATG 
    GCTGCAACCC GGTTCCAGCG TTCTTTCATT CAGCTCCTAG ACAATGCCGG 
    TTTTGAAGAG CTTTCAGCTA GGGATTTGGC ATTGACCTCG GCTCTTAACA 
    CGGATTACCT TCTTACTTTG CCTGTATATG TTGATTGGAA GAAGGCGTCA 
    GAGTCCAATG CTATTGTTTT CAGGTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19277177 [Map]; Strand: c
      • AT2G46915.1 - [+] show detail - Protein of unknown function (DUF3754)
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2622-1 - 3-prime edge 
    ACCTCCTCTA GGGACTGAGT AGCGACGAAA TCGGCTCTCA TCTGCTCTAA 
    AATCCTCTTA TGCTCCGCGT GAAGGATAGA GTCTAAGCAC CTAAAGAGTT 
    CCAAAAACAG CTCAAGAGAG ACTCCAATAA ACAAATTCAC GTTAGTTTAG 
    GAGATTTATA ATTAGCCTTA CGAGGAAAGG AGGAGGAAGA TATCAGCGTC 
    TCCTCCGTCT TGAGAATCGA GAAGCTTCGT TACAATACCA TTAACGAGAT 
    CAGACTTGGA GACATTGATG TATTTCTCAC GAGGAACATG AATACTCGAA 
    ATCCCCTCCT CCTCCTCCGA ATCGTCATCT TCTACTCCTC CTTCACCTTC 
    ATCTCCCTCG A

AT2G46915.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF3754)
Computational Description
Protein of unknown function (DUF3754); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3754 (InterPro:IPR022227); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3754) (TAIR:AT3G19340.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR