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Mutant Lines
53-2643-1

53-2643-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 16561790 [Map]; Strand: c
- AT4G34710.1 - [+] show detail - arginine decarboxylase 2
  Distance: 0; Region: exon1 (CDS)
- AT4G34710.2 - [+] show detail - arginine decarboxylase 2
  Distance: 0; Region: exon2 (CDS)

GATTCAAAGA TGCTGAGTAT ATATCATTGG CTCTGCTTGG GAGAAAACTG 
GCGTTGAATA CTGTGATTGT GCTTGAGCAA GAAGAAGAGC TTGATCTGGT 
TATTGAGCNT GAGCCAGAAG ATGAATGTGA GGCCTGTCAT TGGGTTAAGG 
GCTAAGCTGA GGACTAAGCA TTCGGGTCAT TTCGGATCAA CTTCTGGTGA 
AAAGGGTAAA TTTGGATTGA CTACTACTCA GATTGTTCGT GTGGTGAGGA 
AGCTGCGTCA ATCTGGTATG CTTGATTGTC TCCAGCTTCT GCATTTTCAT 
ATTGGTTCAC AGATTCCGTC GA

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 16561906 [Map]; Strand: c
  - AT4G34710.1 - [+] show detail - arginine decarboxylase 2
    Distance: 0; Region: exon1 (CDS)
  - AT4G34710.2 - [+] show detail - arginine decarboxylase 2
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-2643-1 - 3-prime edge
```
TTTGAATCCA TTGCACACAA GAAAGGCATC AGGGCTACCT TTACACAAGC 
AGCTCATAGC AAGAAGGATC TCAGGTTTAG AACCAGCTTC TAATCCAAAT 
CGAAACGAAG ATCCAAACTT GACAATATCT TCAACAACGA ATCGATCTTG 
GTTACATTTC ACCGGATAAA CACCTTGGTA ATGAGAATCA TATCCTTGAC 
TTTTAATCGC GTAATCAAAC GCAGATTGAA GACACTCGA
```

AT4G34710.1

Model type: Protein coding
Short Description: arginine decarboxylase 2
Curator Summary: encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.
Computational Description: arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 7853 Blast hits to 7777 proteins in 2122 species: Archae - 112; Bacteria - 5255; Metazoa - 102; Fungi - 32; Plants - 645; Viruses - 2; Other Eukaryotes - 1705 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G34710.2

Model type: Protein coding
Short Description: arginine decarboxylase 2
Curator Summary: encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.
Computational Description: arginine decarboxylase 2 (ADC2); CONTAINS InterPro DOMAIN/s: Orn/DAP/Arg decarboxylase 2, C-terminal (InterPro:IPR022643), Orn/DAP/Arg decarboxylase 2, conserved site (InterPro:IPR022657), Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site (InterPro:IPR022653), Ornithine/DAP/Arg decarboxylase (InterPro:IPR000183), Arginine decarboxylase (InterPro:IPR002985), Orn/DAP/Arg decarboxylase 2, N-terminal (InterPro:IPR022644); BEST Arabidopsis thaliana protein match is: arginine decarboxylase 1 (TAIR:AT2G16500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR