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53-2655-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23348779 [Map]; Strand: w
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 1215; Region: intergenic
      • AT3G63210.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 4836; Region: intergenic
    Flanking Genome Sequence: 53-2655-1 - 5-prime edge 
    CTATCTATAC ATATAATTTT TTTATTTTGT TGTGTGTTCT TTCGTCAACA 
    AAACATAATA AGCAAAATTA AATAGAAGAA GAATTTCTTC TTTCTTAAAA 
    CTTTTAAATC AATGGAACTN GAGTTACNTG ATGTATAAAT ATTGATGATG 
    TCGTATCTAA CTCCAAACCA CAAATCTTAG GAATGTTTTG TTTGCCGTAT 
    AGTGTATAAT TTTGTCGGTC GTTTGATTCG AGAATAATTT TATTAAATTT 
    ATTTATTTGT TATCATATTT AAGAAACAAG TCAAGTACTA TTTGATATTT 
    GATTTCAGAA TCTGTAAATA TGATTGACAG AAACAAAGAA AAAGAATATG 
    TACGTATTAA TTAAACACTC AATTTTTGTA AGGCAGATAC AATGAATTAA 
    CAAGGATGCG ACAAAACAAT TTTATTTTAT TTTCAGAAAT ATGCAACAAA 
    CAACGATATT CATTTGACAA TATTTTAAAC TACGAAAATT ACGAGAGTTA 
    TTAGAATTAT ATATATACTT CGATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23348663 [Map]; Strand: w
      • AT3G63200.1 - [+] show detail - PATATIN-like protein 9
        Distance: 1099; Region: intergenic
      • AT3G63210.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 4952; Region: intergenic
    Flanking Genome Sequence: 53-2655-1 - 3-prime edge 
    ATAGATAGTG GGGGAATGCA TTGAACATCA ATAATTCCGT TGGACGAAGG 
    GAAGGTTTCT TGTTGTTTTA TGCTGAATAT TGTTTATTTT TTATTTCCCA 
    TATTAATTGA AGAAAGCAAT TATTTAAGTT TGGCAGCAGT ATACAGACAT 
    CAAATATTTA TGCCATCAGA AATGTCTGTC AAACAATTTC CGATATTTTG 
    TTGTTATTTA GGCATCTCGG GGTTCATCTA CCTCG

AT3G63200.1

Model type
Protein coding
Short Description
PATATIN-like protein 9
Computational Description
PATATIN-like protein 9 (PLP9); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63210.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Curator Summary
encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT3G22550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR