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53-2673-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15773294 [Map]; Strand: w
      • AT2G37590.1 - [+] show detail - DNA binding with one finger 2.4
        Distance: 2675; Region: intergenic
      • AT2G37600.1 - [+] show detail - Ribosomal protein L36e family protein
        Distance: 951; Region: intergenic
    Flanking Genome Sequence: 53-2673-1 - 5-prime edge 
    ATCATAATAC AGTGTCACAG TCGATTTTGG CCAAAATAAA AACTAATCGG 
    TCAGCCACTG GTGTAGACAA CTTAAAGGAA AAGAAAACAG CGATGATAAA 
    GTGGCGTCTA GAACAGAAGA AGTATCGGTT CACAATAATT ACAATATTTT 
    CATAATGAAA ACTTTGAACA AACGATCAAA ACTTTTTTTT GGTAGCCGCG 
    CTTTGTGTTG GAGTCTCTTA TTTTGTGTTT TGTAGATTAT GATATTACGG 
    CGGCTTGGAC AATAACATCT GTAATATGCA ATTGCCAAAT GCCACAAGTT 
    TCCAATAGAT ATTTTATGGT TTAAATTGGA ACATGGACTT CTCCTTTTGT 
    ACGCAACAAA AAATTTGTAG ACCTTTTAAT CTTTAGGAAC CAAAGATATT 
    ATATTGAATT CAATTAGTTC ATTATCTAAC ATCCACCAGT ATTTGAACTG 
    ATCAGTTACA TATTCACATT TAGCCAAATT GTATTTAAGC ATCATCGATT 
    CTCCAAAAGT TTCCCATAAA TCCACGTTGC ATCACATATG ATCAAATAAT 
    ACTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15773180 [Map]; Strand: w
      • AT2G37590.1 - [+] show detail - DNA binding with one finger 2.4
        Distance: 2561; Region: intergenic
      • AT2G37600.1 - [+] show detail - Ribosomal protein L36e family protein
        Distance: 1065; Region: intergenic
    Flanking Genome Sequence: 53-2673-1 - 3-prime edge 
    AATTTATACC ATTAAGGTAT CCGATCAAAT AATGGCCAAA ACTATTCGGT 
    TTTATAACCT TGGGAAAGTG TATTAATTAA ACAGTAGAGC AGTGATTATA 
    AAATTTTGTA CACATGCGTA TATAACTTAA ATTGTACCTT TACGATCTAA 
    AATTTCGACA CATTTGCTTA AAAAGTAATT TTATAAGTGA TTTAAAAAAA 
    ATGAAATTAT ATATGTTTAT GCCTTCTTTT ATTTGTAGTC TCAGGAAAGT 
    AAGTGAAAAC ACATGCTGTA AAAGTGAAAG CTGCTGTAGA AGTAGTACAC 
    AAATATGCTG GTCGTCGTCT ATATATGCCT AGACCTTCGC ATAAATTCAT 
    ACATGGATGT GCATACATAT AATATATATA TTTATGCACA GAAATACATA 
    CATGATCAGG AGACAAGATT TAACTTGGAT TTCTGAGCCT ACTCTGCTTA 
    TGTTGGGTCT CATATACAGA AGCCTATCTT GATTTATGCC TAGCGCTATT 
    ATCACTTCAA ATCATTAATT GACGAGTAGC TGATAAGATA ACGTTTTTAG 
    GATTGTTAAA GTTCTGATTT

AT2G37590.1

Model type
Protein coding
Short Description
DNA binding with one finger 2.4
Computational Description
DNA binding with one finger 2.4 (DOF2.4); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: OBF-binding protein 3 (TAIR:AT3G55370.2); Has 1447 Blast hits to 1391 proteins in 103 species: Archae - 4; Bacteria - 20; Metazoa - 104; Fungi - 10; Plants - 1085; Viruses - 0; Other Eukaryotes - 224 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G37600.1

Model type
Protein coding
Short Description
Ribosomal protein L36e family protein
Computational Description
Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT3G53740.4); Has 755 Blast hits to 754 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 355; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink).
Link
InterPro Scan - TAIR