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53-2675-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21887639 [Map]; Strand: c
      • AT5G53902.1 - [+] show detail - U3B; snoRNA
        Distance: -327; Region: promoter
    Flanking Genome Sequence: 53-2675-1 - 5-prime edge
    ACTCTNAACC ACCCCAAAAA CCGCACGTGA CAGTGACTCT CTCCATTNTT 
    GNCTATATCA TNCTNNAACT TTCAGAGCAA NGTGTAACAN CNTATATNAA
    AATATNNCAT GCNNNNCNAA AGGATNANGA GNNAGTAGNN TATGTATGAA
    TCAATTTTAA AAAAAAAAAA AACGNNNNAA CCGNGNTTTT NNTTNGNTGA
    NAANCNCAAA AATNGGGGGN TTTTTTNTTA AAANGGGGGG GAAAAGGTNA
    AANAAACNNN NNNNGGNCNT NANNANNAAG NAAAGNGGGG NGGGGGCCNN
    GGGGGNAAAA AACNNNAGGG GGTTNNNAAA NNNAGGTNNC CTNTGGGGGT
    NANCGNTTCC NNTTTGGGNN NAATTTANNG NGGNNNNCNT NGGNNANTAA
    NGNGGGAACN CTNTAACGGG GGNCNNTNTT CCCNAANNTT NAAAAANAAN
    CNNANTGGGG ANNACATANG GGGGCCCNGG GGTACTGGGG GGNCCTNGNA
    ANAAANAANG NGGGGNCGTG GGGNNNNTNN GNANNNNNNT GNAGNGGNGC
    CNCNTTTNTA NGANCAANGG GTNGNNNNNN GGNNNNTTNN NTNGGGAAAA
    NANNANNAAT ANGNGATNCA NNNANNGNGG GNANCNNAAA ANGGGGGGCN
    NTGGGAAATN GAAANGTGGN GGNAANAGGG AGNTTTAAAA ATTNNNGGGG
    NTTTTTAAAA CGATNGNGNG CNNGNANAGG
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21887788 [Map]; Strand: c
      • AT5G53902.1 - [+] show detail - U3B; snoRNA
        Distance: -178; Region: promoter
    Flanking Genome Sequence: 53-2675-1 - 3-prime edge
    TTAAGAGTAG AGCGTGCAAT ATATCGAAGA CCACTTCCAA GTTCCACCTT 
    GTGTTCTTCT GTCTTCGACG AAAAAAAAAT CTACAGTACT TTGGCTTCTT
    TTCATTTTTG TTTGCAGCTT TTTTTTTTTT TTTNNNANNT CCNAAATTNG
    NANGNAAANT AAACCNANTT NNANGGTNNN CANNACCNCC GGNAANNANC
    ANCATTTTNN GTTTAANCCT TNAAAGGTNA GTTANCTTNA AATTTTTTTN
    NGGGCNNACC CNGGGNGGGN NANCNNGANN NAANCAANGG GGGTNGGGGT
    TAAAAAAAAT NNGTTTGGGN TTTNTGGNNC AAANNANGGN ANCTTTNNGG
    ANNANCTNNN NTTNNTNTTN GGNNCTTNTT TCNNCCANNA AAAAANGGGG
    GCTTTTNNNG NAATTAAAGG GGCTNTNGCC CNTANATNCC CTANTCCCCN
    NNCCCAGNCC CCNNGTTNGC GTTNAANNNA ANCCCCNANT TTNNCCCNCN
    TNGNNNAAAT TNAANNAAAT TTNGNNGTNT TTTNANCNCN GGGGGANCAN
    CTTNGGTCAC ANCNTTNNTN NACNAGGATN NGTTNTNNAG GCNCGACCCT
    TNGTTCCCTG GATTTNTAAA AAAANGGGCC CTTAACCCNG GTGNAGNAAC
    NATNACCNGG CGGTTAAANC GGGATGGACG GNTACAANCG NCCTGGGACN
    CTTCCGGGGC TGNAAANGAN CNTTC

AT5G53902.1

Model type
Small nucleolar RNA
Short Description
U3B; snoRNA
Curator Summary
U3 small nucleolar RNA
Link
InterPro Scan - TAIR