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53-2692-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041424 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -70; Region: promoter
    Flanking Genome Sequence: 53-2692-1 - 5-prime edge 
    TATATGCTGT TGAATATAAA CAGTAAATAA ATTAGCAAAC CCAAATTGCA 
    CACTAAAAGA AAGACTTAGT CAGGTCAATG GTGGAAATGG GTAAATGTGT 
    TTTCTAGTGC AGCTTCACCA ACGGAAGAAG ATGAGGGTTA AGAGGACAAC 
    AATGTCCCAA CATCAACGTC ATGATTTTTT TCTGGGAAAC TAAGGAGTAA 
    ACCAAGAAGC ACGTTCAGCA ATACATTGGT ATCAATTATA TAAGATCAGT 
    CCAAACAAAG ATTGTCCCTT TTTGTTTATT GTTTTTGTGT TTTTCTTTGA 
    ATATTCATCN CCTTCGACC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041557 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2692-1 - 3-prime edge 
    GTTTTTTGAT TTTTCCTTGT GAGTTGAGAG AATATGGAGG GTTCTGTTGG 
    GCTTTTGTTG GTACTGTTAA CTTTGGCCAT CATTCATATT GTTCAAGCTC 
    AAGACCAACT AGGTATCAGA CATATGTCTT CTATGTACAT CATTCATATT 
    GTTCAAGCTT CCTTCCTATT CTTTTACAAA CGTTTTGGTT GTCAGAAGGT 
    TTTCATCTCA CCTCGA

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR