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53-2698-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23440035 [Map]; Strand: c
      • AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2698-1 - 5-prime edge 
    CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCTC TCACCGGCGA TGTACAAGTC CCTGCCTTTG 
    TACTCCGGGA ACCTCTCCAG CCAGTTAACC AGGAAGATGT AGTTATCAGC 
    TGCGGTATTC CTGTCCCCGT GCTTCTCCAG GTCCGACGTC GTGTTGGTGT 
    ACGAGAACCC CACTCCCGCC GGCGATTCTA AGAACAAGAC ATTCGCAGCT 
    GCACCACCAC CACCCGTTTG ATAATTTTTT AATCACAAGA ATCGTTTACC 
    ATTAATTTAT TTTTGTTATT TAATAAAAAA GAAAAACGAT AGGTACCATT 
    GTTCCATGCA TATCGGTTTC TAAAAAGCGT TTTGCCGTCG CTGTGTACTC 
    TGAACGGCCC AAGCTCTTGT AATGCTCCAT ACGCCAGTGA CGAGCATCCC 
    GGTCCTGTTA ATTATTTCCA ACACACTTTA TGCATATGTA TGTATTATTA 
    GTCACCCATA TTTCTGTAAT CAAATTCTCG ATTTTGTGAC AGAGCTAATT 
    CACTGATGAG CTTACTATTA ACGTCTCTGG TGAATTTGAA TATATGTTGT 
    ACATTGCATT TTATTTTTAT GGAAATCAGT ATATAATATA TAGATAGATA 
    CGTAGTGGCT GGCTAAATAA TTGACCAGTA GAGCTGTGCA ACAAACAAAG 
    CACGCCGAGA AATCCTCAGC ATGTGCCATT TTTGAAAAAA GGCAAATCAT 
    TTTTCTTTTT CTTTTCTCAG TTGAGTTTTC GATTGGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23440095 [Map]; Strand: c
      • AT3G63470.1 - [+] show detail - serine carboxypeptidase-like 40
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2698-1 - 3-prime edge 
    TGCCGGCCAC TATGTTCCGC AACTTGCCCA TACTATCCTT CTCCATCACC 
    GGAGCTTCTT CAATCTCAAG GGCATTCTGA TAGGAAATGC GGTGATCAAC 
    GACGAGACCG ACTTGATGGG TATGTACAGA CTTTTTCGAG AGTCATGCNT 
    TTGATCTCCG AAGATTCTTT GGCTAGACTC AAGAGCAACT GCGATCTCAA 
    GACGGAGTCT GCGAGTGTAA TGACTGAGGA GTGCGCGGTG GTGTCCGACC 
    AAATAGACAT GGATTCATCT

AT3G63470.1

Model type
Protein coding
Short Description
serine carboxypeptidase-like 40
Computational Description
serine carboxypeptidase-like 40 (scpl40); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 39 (TAIR:AT3G52020.1); Has 3527 Blast hits to 3467 proteins in 341 species: Archae - 0; Bacteria - 144; Metazoa - 641; Fungi - 871; Plants - 1469; Viruses - 0; Other Eukaryotes - 402 (source: NCBI BLink).
Link
InterPro Scan - TAIR