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53-2699-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134286 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -240; Region: promoter
    Flanking Genome Sequence: 53-2699-1 - 5-prime edge
    ACAGCAATAT ATTTATCTTC TTGTATATAA ATAAATAAAA ATATGAAAAA 
    TGTATGTTAT ATATGTTGCC TTCGCAAACC AAAAACAAAT TGGGGTGTTT
    ATCTAATCCT ATATAGTATA CCGGAACATA TTGTCCGTTC CGTGCCATAC
    AAGGTCCTCC TCTGTGTCTC ACATGTGAAG TTAGGAGGCT TTTTTCGCTA
    ACAGCTAACA TGCTTGAAGC T
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134507 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -19; Region: promoter
    Flanking Genome Sequence: 53-2699-1 - 3-prime edge
    ATTGCTGTCT TCCGGTTCGA CTTCGTGATC TCACCAAAGA AACACGCAAG 
    ATCACTTCCA TCGATCAATA CATGGATACA TCAGCAGTAC AACTACCCTT
    TCGCGATTAT TCTCTTCAAC CTGCTCCTCG GTACATCAAC GCTAGATGTC
    ATATCTGCTC TGTAACAGGT GCCATCTACA ACGGCTACTT TTGCAATGAT
    CCTATTGTTT GGATGCATAA GGAGTGCGTT GAGCTCCCAT CTGAGATCAA
    CCATCTTTTC CACCCCCAAC ATCCTCTCTT GCTCACATAT GAAGAGGGAT
    GGTGGAGTTG TTTCTGTGCT TTGTGTGGAG AAACAAAGCC AGCGAAGTAC
    TTTTATAGTT GTTCCACATG TAAAATCAAG GTGGATTTGA CTTGTGGGAT
    GAACCCACCA CCGCCAGCTA TTGAACATCC CATCTGCCAT GACCATCCAC
    TTGTCTTCCT GAAGAAAAGA CAGGAGAAAA CCCCTTGTGA AGTTTGCAAG
    AATAGAATTA TTGGATCATC CTATTCATGT CTTGGATGCG AGTTGTACTT
    CCACGTGGGC TGCATCCATC TCTCGAAAGA GGTAAATCAT CCCTTGTCAC
    TCTGATCATC CTCTCATGCT CGTCGAATCT GAATCACTTA CAGATAATGA
    TAAGAAGACT TGTTTTCTAT GTGGGCAACA ACCGCATGGN ATTCTTTATC
    ATTGNTCTAT CTGCACTTCA CACTGTGCAT TGGNTGN

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR