1. Home
  2. Mutant Lines
  3. 53-2699-1

53-2699-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134286 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -240; Region: promoter
    Flanking Genome Sequence: 53-2699-1 - 5-prime edge 
    ACAGCAATAT ATTTATCTTC TTGTATATAA ATAAATAAAA ATATGAAAAA 
    TGTATGTTAT ATATGTTGCC TTCGCAAACC AAAAACAAAT TGGGGTGTTT 
    ATCTAATCCT ATATAGTATA CCGGAACATA TTGTCCGTTC CGTGCCATAC 
    AAGGTCCTCC TCTGTGTCTC ACATGTGAAG TTAGGAGGCT TTTTTCGCTA 
    ACAGCTAACA TGCTTGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24134507 [Map]; Strand: c
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -19; Region: promoter
    Flanking Genome Sequence: 53-2699-1 - 3-prime edge 
    ATTGCTGTCT TCCGGTTCGA CTTCGTGATC TCACCAAAGA AACACGCAAG 
    ATCACTTCCA TCGATCAATA CATGGATACA TCAGCAGTAC AACTACCCTT 
    TCGCGATTAT TCTCTTCAAC CTGCTCCTCG GTACATCAAC GCTAGATGTC 
    ATATCTGCTC TGTAACAGGT GCCATCTACA ACGGCTACTT TTGCAATGAT 
    CCTATTGTTT GGATGCATAA GGAGTGCGTT GAGCTCCCAT CTGAGATCAA 
    CCATCTTTTC CACCCCCAAC ATCCTCTCTT GCTCACATAT GAAGAGGGAT 
    GGTGGAGTTG TTTCTGTGCT TTGTGTGGAG AAACAAAGCC AGCGAAGTAC 
    TTTTATAGTT GTTCCACATG TAAAATCAAG GTGGATTTGA CTTGTGGGAT 
    GAACCCACCA CCGCCAGCTA TTGAACATCC CATCTGCCAT GACCATCCAC 
    TTGTCTTCCT GAAGAAAAGA CAGGAGAAAA CCCCTTGTGA AGTTTGCAAG 
    AATAGAATTA TTGGATCATC CTATTCATGT CTTGGATGCG AGTTGTACTT 
    CCACGTGGGC TGCATCCATC TCTCGAAAGA GGTAAATCAT CCCTTGTCAC 
    TCTGATCATC CTCTCATGCT CGTCGAATCT GAATCACTTA CAGATAATGA 
    TAAGAAGACT TGTTTTCTAT GTGGGCAACA ACCGCATGGN ATTCTTTATC 
    ATTGNTCTAT CTGCACTTCA CACTGTGCAT TGGNTGN

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR