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53-2715-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24054708 [Map]; Strand: c
      • AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2715-1 - 5-prime edge 
    GAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCTAT TTCACTGTGA GTTCCAGAGT TATGAAGGAA 
    TACTCTCTGA ATGTAGCTAC GGATCATCTC GAGCTCACGT TTACTCCCTC 
    GGGTGATTCG TTTGCGTTTC TGAACACGCT CGAGGTTGTT TCGGTTCCTG 
    ATACGTTGTT CAGTGGTGAT CCTTCCTTTG CAGGCAGTCC TGGGAAGTTT 
    CAGGGCTTGT CATGGCAAGC TCTTGAGACG GTTTATAGAG TGAACATGGG 
    CGGTCCGCGT GTTACGCCTA GTAACGATAC TCTTTCGAGA ATTTGGGAGC 
    CTGATTCTGA GTTTCTAGTT GAGAAGAATC TAGTTAAGAG TGTGTCTAAG 
    ATTGCATCTG TTGATTATGT TCCTGGTTTT GCTACAGAGG AGACTGCTCC 
    TAGAACTGTC TATGGTACTT GCACCGAGAT GAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 425114 [Map]; Strand: w
      • AT2G01918.1 - [+] show detail - PsbQ-like 3
        Distance: 0; Region: intron1 (CDS)
      • AT2G01920.1 - [+] show detail - ENTH/VHS/GAT family protein
        Distance: -938; Region: promoter
    Flanking Genome Sequence: 53-2715-1 - 3-prime edge 
    GTTATTACAA CAATAAATTT TGTTTACTTA CATGGACAAA TGGTAAAGCT 
    CTTTACAATT ATATTCCAAT GTAAACTTAA AGTCACAAGG TTCAATTTTC 
    TTCTTCAAAC ATTTTTCTGT TTTTAAGATT ACCGAATTTT GATCTACTTG 
    ATTTATCCGA ATTCCGAAGT AAGTTTACAA AAACTTTATT TTACATGGAT 
    ATTAAATGCT AAGGCTGATA CATACTCCCT CCGTTTCATT ATAAGTTGTT 
    TTCAAGTTTC TATGCAAATT ATATATTACT TTAATATTTT ATGATTATTT 
    ATATTATGCA GTCTCTTTTG TGATTGATTG AACTTTTTAA AAGTAAATAT 
    TCTTAATCTG CGTGCTTTTA GCTAAAACAA CTTATATTGT GAAACAAAGA 
    GAGTAGATTT GTAAGTTATC AATCACTTTG TATTATTGGG GTTTTAATCC 
    TCCGTAATAT GTTTGTGGAA GACTCTTTGT AGCAAGAGTT ACAAATTATG 
    AATTCTTCGT GTATTTTGTA TATATGGTT

AT2G01918.1

Model type
Protein coding
Short Description
PsbQ-like 3
Curator Summary
Encode a protein homologous to each PQL protein. Mutational analysis indicates that PQL3 is also required for NDH activity.
Computational Description
PsbQ-like 3 (PQL3); CONTAINS InterPro DOMAIN/s: Photosystem II oxygen evolving complex protein PsbQ (InterPro:IPR008797); BEST Arabidopsis thaliana protein match is: photosystem II subunit QA (TAIR:AT4G21280.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01920.1

Model type
Protein coding
Short Description
ENTH/VHS/GAT family protein
Computational Description
ENTH/VHS/GAT family protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14686.1); Has 316 Blast hits to 316 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59700.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR