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53-2721-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23736138 [Map]; Strand: w
      • AT5G58780.1 - [+] show detail - Undecaprenyl pyrophosphate synthetase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2721-1 - 5-prime edge 
    GCTGTAATCT ATTGCCAATA TGAGATGCTT CTTCTTATAG CTTCTCGTAG 
    CTTCCTCTAT CTCTTGGACT GTTCGGAGGA GAGACTCAGG GATCTTCGTT 
    AGGTTCCCGA TAACAGAAAC TCGAGTTTCC TCTCTGAAAC AACAAGATTT 
    TGGTAATCCA TGAGCAGATC ATTTGTCAAC AAAAAAGCTC AATTGAGTTG 
    TACTTTATAC CTTTGGAAAT ATTGGATCTT GGACTTGAGG TAATGTTGGA 
    TCAAAGACAT CAAGCACTTA ACCTCAATCT TATTAATACC AACAAATCGT 
    TAGAGTCAAG AGTTGAGTGA GAATGTAAGC TACATAGTCT AAAATATCAC 
    ACCTTGTGTC TTCCCCAATT CTCTGTGGAG AAAGCAAAAG CTGAAACTGT 
    ATGAATCCCC AATTTAAAGC AAAACTCGGA GAACTCTATA AGCCGTTTAG 
    CTCCGGCCTC GTGGCCTTGA GACGTCAGCA ATCCGGCCCG TTTGGCCCAT 
    CTCCGGTTTC CGTCCATTAT CACTGCCACA TGTCTTGGCA TCAGCTCTCT 
    TTGTAGCTCC TCCACTCCTA CAACATAAGT TCCCTCGTCA CTACACAAAC 
    ACAAAACTAA AGCTACATTA GGAACGATCT ATCATTGAAA CTGTGAATCT 
    TANGCGCAGA TAGTCTATTT GACAATTTTG GAAACATTGC CAAAATCTTC 
    TACTAAGCAA ACAAGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23736066 [Map]; Strand: w
      • AT5G58780.1 - [+] show detail - Undecaprenyl pyrophosphate synthetase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2721-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCA 
    GCGGGAGATT AGACATCTTG CGAGCTTGCA AGAGTATTGT GAAGAAATCA 
    GAAAAAGGGT TGATCCGAGA GGAAGATGTA GACGAGGCAT TGATCGAAAG 
    AGAGCTTCTG ACAAATTGTA CTGAGTTCCC AAGTCCTGAT CTATTGATTA 
    GGACAAGTGG AGAACAGAGG ATTAGTAACT TCTTCTTGTG GCAACTTGCT 
    TATACAGAGC TCTTCTTCTC GCCGGTCCTT TGGCCTGATT TCGATAAGGA 
    TAAGCT

AT5G58780.1

Model type
Protein coding
Short Description
Undecaprenyl pyrophosphate synthetase family protein
Computational Description
Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: dehydrodolichyl diphosphate synthase activity; INVOLVED IN: dolichol biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: cis-prenyltransferase (TAIR:AT2G23410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR