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53-2725-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22880663 [Map]; Strand: c
      • AT3G61820.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2725-1 - 5-prime edge 
    GGGCCGTGGT GGGTTATCTT TCCCGTCGCA GACGAAAAAC CGTTATAACA 
    GGAAAATTCT CTTACTGTTT GGTTGACCGG ACGAGTTCCG GTTCTTCTTC 
    TAAACCACCG TCAACAATCG TGTTTGGAAA CGCCGCCGTT CCGAAAACCT 
    CTGTTTTCAC GCCGTTACTA ACGAACCCGA AACTCGACAC GTTTTATTAC 
    TTGCAGCTTC TTGGAATCAG CGTTGGTGGT TCGCGCGTTC CCGGCGTTTC 
    GGAGTCGCAG TTCAAGCTTG ACGCCACCGG AAACGGCGGT GTCATTATAG 
    ATTCCGGTAC TTCGGTTACT CGGCTGACGC AACCTGCTTA CGTAGCGCTT 
    AGAGACGCTT TTAGACTTGG TGCTACGAAG CTGAAACGTG CTCCATCGTA 
    TTCTTTGTTC GACACGTGTT TTGATCTCTC GGGAATGACG ACTGTGAAGG 
    TTCCGACGGT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22880779 [Map]; Strand: c
      • AT3G61820.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2725-1 - 3-prime edge 
    CACGGCCCAA GCCCAAAAGC CCAGCCGCAC CAACGAACAA GCCTTCGTTA 
    TCGTGACCGC ATCCTAACGG CACGTGATCA ACACGCGCTC CATGAAACAG 
    TCAGCAGTTT CAGTTGAGAA ATCTCCTTCG GTGAATGATC CGTCACCAGT 
    ACGATACTTG GTAGAGACAA GTCTTGCTTC GACGAGTGAC ACATTCCGAC 
    GAGTCGTCTA GTCTCCGGCA AAGGCGAGAT CCACATGGTA CGGTGGCGAA 
    AGTTTTGGAT TTCTTCGGGT CAAAAATGGC GTCGGTCTGG TTGTAACAGG 
    CTTTGCAAGG AGAGCATTGG AGCCAAACGA CGTCGCTTCC TGTGTCGAGC 
    ACCATGTAAA CGTTAGTCGC CGGAGTTCCA ACACCTAACC TCATAAAATA 
    CTCTCCGCTT CCTTGTGAGA GGCCAGAGAT AACTGCGCCG CTAAATCCAC 
    CGGCGGTACG TG

AT3G61820.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G01300.1); Has 3770 Blast hits to 3746 proteins in 344 species: Archae - 0; Bacteria - 0; Metazoa - 956; Fungi - 705; Plants - 1946; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Link
InterPro Scan - TAIR