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53-2729-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24036154 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2729-1 - 5-prime edge 
    GTTGTCCATG GATTAGGTCC AAGATACAGA TCAAACTTTG GATTAATGTC 
    AAGACCATCA TAATTTCCAT AGATAAAGTA AGCCCTGATC AAATGTGTTA 
    TTCCCTTCTC AACGTTTAGA TTGTAGCAGT TCCGAATTCC ATCTGGAAAA 
    TATCTCAACG TCTCGTATGG CTTCAGGTAT CCCTCTCTAT TTGGTTTGAT 
    TCGGCCAGCT TTTCCGCTTT GGATGAACTT TTCGTCAGAT AAGAACCGTA 
    AACCTGTCGT CGGCTCATCA TAAGGAGACA GTTCATTCGC CGGTAGCCCG 
    CAATCCAAAC TGATGAAACC TGCTAACAGA AAGAAAAAAA AGACCGTCAA 
    AAACATTACA TTCTGAGAAA TTCTAGAATC TGCAAACACA AGTACCATTT 
    TAAGAGGCGC ATATTCATAT AAAACAGCTA AGATGTGAAT ACCTTGTTGC 
    TCCTGAGCTT GAACAATATG ANTACTTACC ANGGNTCCTA ATACCGCCNC 
    CNNNACCCGA CAAGGACTCT CCATAATTAG NNACTTCTGA AGATTTNTCA 
    NAACATTNCA ATNCCNAAGG NTNGGAGANA TNNCCCCCGC NCCTGNNTNA 
    AANAAACNTN NACGGCCTGG GANGGAAATA AAACCNCNGG CNNCTGAAAA 
    AAGGNTTTNN NGNGAAAAAA AANANTGGGG NNTGNNTGNA ANAAAAAAAA 
    AAANTGGNTT TTNTNTGAAA AAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24016979 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -369; Region: promoter
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -479; Region: promoter
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: -532; Region: promoter
    Flanking Genome Sequence: 53-2729-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG GTAGATTTGC 
    AAAAAGAAGT GAGTGGTACA CGGGCGGAGA TCTTTCATAT TCCAATATCA 
    AACTCATTGC ACGTTTGTCT TGTTAAGACC GGGACAACTA CTCCGCTAAT 
    AACCACCTTG GAGATAAGGC CTATGGGAAA TGGAACTTAC ATTACTAAGT 
    CTGGTTCTCT GAATCTTTAC TTTCGGCTAT ACCTTAGCAA ATCAGACGGT 
    TACATAAGGT AATTAAATTT CAACNTGAAA CTCTTCTCTT CTTTCTGCTC 
    TGGTTTTATA CTCTGTTTCT TATTGCTCTG TTCTCCTCTG TATTTGGCTA 
    TGTCAAAAAG TTGATATTTG CCATCGTATG TACTCATTCC ACTGCTAAAA 
    CAAAGTTGTT TGTGTCACAA GGTACCGGAA TGATGTCTAT GATCGTGTAT 
    GGACTACGTT TTCAAGGAAT GAATGGAACC ACATTTCCAC CACCCTGGAA 
    GTGAGCAATT CAAATAAGTA TTTTCCACCA AAAGAAGCAC TCAAAACTGC 
    TGCAATACCT TCTAATTCAA GTGCACCATT GACGATGGAA TGGAGTTCGA 
    GTAATGTCAA TAACCAATAT TACTTGTATG GACATTTTGC TGAGATCCAA 
    GAGTTGCAGA CCAACGATAC AAGGGAATTT AACATGTTTT GGAATGGACA 
    AGTCATCGCC GACCCTTTAA TACCTCCAAA TTCACTATTT CTACTATCTT 
    TAGCCAGTCA CCAAGTACTT GTGAAGGAGG AAAATG

AT5G59613.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59613.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
Link
InterPro Scan - TAIR

AT5G59616.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR