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53-2749-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24039766 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron16 (CDS)
      • AT5G59662.1 - [+] show detail - other RNA
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 53-2749-1 - 3-prime edge 
    ATACATGTAT TTTCGCTGAG ATCCAAGAAT TGCGTACTAA CGATACCAGA 
    GAATTCAACG TGGTGTGGAA TAGGGGAAGT TATGTCTGAT CCTATAATTT 
    CTCAAAACTT ACAAAGAAAT ACTATCCCTA GTTTGTCGCC GATGACTTGC 
    AAAGGGACGC AATGCAGTTT TCAGTTGATA AGAGCTAACA GATCAACTCT 
    TCCACCTCTA CTTAATACTT TTGAAGTGTC CACAGTTATC CAGTTCCCGC 
    AATCCGAAAC AAAAGCAACC GATGGTACTT AGTAAGGAAA CAAACCATAG 
    AGATTAGAGA CAAAAGAGTA TTCAAAACCT GTTTAATCCT AACGCCGTAT 
    CATCTGAACC TTTTCTGTGT CAGTTGATGC TAGAGAAACT ATAAAAGTCA 
    CCTATGGATT GAGTAAAACA AATCTAAACA TGGTTGTGAT TTCTTATTAA 
    ACGAAATAAT TAGGCTAATC AACTCGAGAT GAATTTAATT AGGTGAGAGG 
    AATCAAACAA ACGAAAAGAC AGTCTTGTGG GACTCGTCTT ATATCATTGA 
    TACCAATTCA TTA

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59662.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT5G59660
Link
InterPro Scan - TAIR