Home
Mutant Lines
53-2751-1

53-2751-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23450862 [Map]; Strand: w
  - AT3G63500.1 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -667; Region: promoter
  - AT3G63500.2 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -664; Region: promoter
  - AT3G63510.1 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: exon2 (CDS)
  - AT3G63510.2 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 53-2751-1 - 5-prime edge
```
GATGGATTGG ACAGATAATC ATTACCGGAC GCTTGCTCGT CTCATAACAA 
AGCACGCTTG GCTTTACACT GAAATGATTG CAGCTGAAAC CCTTGTTCAC 
CAGCAGACCA ATTTGGTAGA CTAATTTTGT TTTCTTAAAT TTGTGTCGCA 
TTGAAGAATC TCGCTAGACA TGTCCGTTCT TCTGCACTTT GCCTCAGGAC 
AGGTTCTTAG CGTTTTCTCC CCAACAACAT CCTATTGTTC TCCAACTTGG 
TGGTAGCAAT GTGGAAAACC TTGCAAAGGC TGCTAAGCTT TCTGATGCTT 
ACGGATACGA CGAAATTAAT CTCAAGTTTG TTCAGTTTCT T
```
3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23450741 [Map]; Strand: w
  - AT3G63500.1 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -546; Region: promoter
  - AT3G63500.2 - [+] show detail - Protein of unknown function (DUF1423)
    Distance: -543; Region: promoter
  - AT3G63510.1 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT3G63510.2 - [+] show detail - FMN-linked oxidoreductases superfamily protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-2751-1 - 3-prime edge
```
ATCATCGGGG CGACGCTGGA GAGCAAAAAT CTAGTAAGAA CCGAATTAGT 
GGGAGTTAAA GCCCTGAGTC TGAGAGAGAG CAAAAAACCT GAAGGAAGGA 
GGAAGATAGG GAGACGAAGT GGAGGAGAAT CTAGCAGTGG GTTTGAGCAT 
TGGGGACTTG AAGAACATCT CAGAGACATT TGGTCGAACA GATGGTAGAC 
ACCACATTTG GATTGGAGAA GATAATGAAA CCGTTTGTTT GGAACTAGCA 
TAACAGTAAG GGAACATTAA TAATGTTTAA AGTATATAAG TAGTTGTGAT 
GGGCCTTACT TTACGCATTT TATATCTATG ATGGAGTAGG AAAGGGACAC 
TGATAGAGCC CAGCAACAAG TTGTCTTTAG TTTAATACTA ATTATTTAAT 
GCTAGTGGTG GAGGATACGA CGACACGCGA TAAGAGTCAA AGATTGGACT 
AGCAACG
```

AT3G63500.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF1423)
Computational Description: Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 795 Blast hits to 695 proteins in 144 species: Archae - 6; Bacteria - 39; Metazoa - 207; Fungi - 61; Plants - 263; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63500.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF1423)
Computational Description: Protein of unknown function (DUF1423); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1423, plant (InterPro:IPR004082); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1423) (TAIR:AT1G14740.1); Has 3195 Blast hits to 2635 proteins in 392 species: Archae - 10; Bacteria - 381; Metazoa - 1310; Fungi - 308; Plants - 351; Viruses - 11; Other Eukaryotes - 824 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63510.1

Model type: Protein coding
Short Description: FMN-linked oxidoreductases superfamily protein
Computational Description: FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11920 Blast hits to 11916 proteins in 2583 species: Archae - 58; Bacteria - 8071; Metazoa - 278; Fungi - 218; Plants - 160; Viruses - 0; Other Eukaryotes - 3135 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G63510.2

Model type: Protein coding
Short Description: FMN-linked oxidoreductases superfamily protein
Computational Description: FMN-linked oxidoreductases superfamily protein; FUNCTIONS IN: tRNA dihydrouridine synthase activity, FAD binding, catalytic activity; INVOLVED IN: regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), tRNA-dihydrouridine synthase (InterPro:IPR001269); BEST Arabidopsis thaliana protein match is: Aldolase-type TIM barrel family protein (TAIR:AT5G47970.2); Has 11664 Blast hits to 11660 proteins in 2553 species: Archae - 58; Bacteria - 8007; Metazoa - 234; Fungi - 152; Plants - 146; Viruses - 0; Other Eukaryotes - 3067 (source: NCBI BLink).
Link: InterPro Scan - TAIR