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53-2771-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9932225 [Map]; Strand: w
      • AT2G23330.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 53-2771-1 - 3-prime edge 
    AACACGTCCT CCACCACTGC ATATCTTATC AACGCATCAG ACAACCCGGG 
    TGCTTTGATC TCTTCTGTTG TTTTAAAAGA AAACAACTAT GCTGAATTGT 
    CTGAAGAACT ACAAAACTCT CTTAGAGCCA AACAAAAACT TTGGCCTTCA 
    TCGATGGATC CATCCCCAAA CCGGCAGCTG ATCCCGAATT AAGTTTGTGG 
    ATCGCCATAA ATTCTATGAT TGTTGGATGG ATCCGCACAT NTATCGATCC 
    AACAATTCGT TCTACAGTTG GTTTTGTTTC AGAGGCATCA CAACTGTGGG 
    AAAAT

AT2G23330.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 3.9e-195 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)
Link
InterPro Scan - TAIR