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53-2776-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25508674 [Map]; Strand: w
      • AT1G68050.1 - [+] show detail - flavin-binding, kelch repeat, f box 1
        Distance: -2; Region: promoter
    Flanking Genome Sequence: 53-2776-1 - 5-prime edge 
    AAGGGTATAT TCGTCAATAA GTCACCAACT AAGCCAAGAT ATTTTAAAAG 
    TTTAAACAGA CACAAAAAGA AATAAAATAT CATAAGGCTG AGAGCTTATC 
    AGAGAAGAAG AAGATATTTC TGTAAGCGAG AAAAATGGCG AGAGAACATG 
    CGATCGGAGA AGCCACCGGA AAACGAAAGA AACGCGGCAG AGTTGAAGAA 
    GCAGAAGAAT ACTGTAACGA TGGAATCGAA GAACAAGTAG AGGATGAGAA 
    GCTTCCGTTA GAGGTTGGGA TGTTCTATTA CCCAATGACT CCGCCTTCGT 
    TCATTGTTTC CGATGCTCTG GAGCCAGATT TTCCTTTGAT CTATGTCAAC 
    AGAGTCTTCG AAGTCTTCAC TGGCTATCGT GCCGATGAAG TTCTTGGTCG 
    TAACTGGTAT ATTAATTTCT CCGATTTCCC CCTTTTTGAA TTGGAGTGTG 
    TTGTTATCAA TTCTCTTGAA TAATGCTGCA TTTGTGGTTG AATCTGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25508538 [Map]; Strand: w
      • AT1G68050.1 - [+] show detail - flavin-binding, kelch repeat, f box 1
        Distance: -138; Region: promoter
    Flanking Genome Sequence: 53-2776-1 - 3-prime edge 
    GAGGCAAGAA GTCTTCGCGC CAGGAGTTGG TGGCAATTTT CGTAATTAAA 
    AGGATATATC AGGGGTATGT TTAAAAAAAG TAAGTCTACT CTTGTTCGAT 
    TGTAACACAG TCACCAGGGG ATATTCCGAG AAAATATCTA GCCTACTCAA 
    CCACTCCGCT TCTTCCACGT CATCATATTT TGTGAAAGAT ATTTGTTTTT 
    TTT

AT1G68050.1

Model type
Protein coding
Short Description
flavin-binding, kelch repeat, f box 1
Curator Summary
Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.
Computational Description
"flavin-binding, kelch repeat, f box 1" (FKF1); FUNCTIONS IN: ubiquitin-protein ligase activity, signal transducer activity; INVOLVED IN: response to blue light, positive regulation of flower development, circadian rhythm, ubiquitin-dependent protein catabolic process, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: whole plant, root tip, male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), F-box domain, Skp2-like (InterPro:IPR022364), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 8646 Blast hits to 5789 proteins in 832 species: Archae - 91; Bacteria - 2197; Metazoa - 2116; Fungi - 922; Plants - 2047; Viruses - 0; Other Eukaryotes - 1273 (source: NCBI BLink).
Link
InterPro Scan - TAIR